Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2512 ATGGTAAAGACAATTCCATCTAAAGCGAAGGTAAGCATAATCAATTTGGTGTTCTTAGCCGTCTTTCTGGTTGTTTATGGAACCCTTCTTCTCCGGCCATCTTCTTCTCTCTATTTCGAGAATGCAGCCTCCCTTGTAAGATGCTCCCTCCGCGAATGTCGACACAAGGTAGAAAAGAGCTTCAAAATGAAAGCAGTGTTAGAGGAACCTCAACGAGAGAGATCATCAAAGAAGAACAATGCAACTAATAAGATAGAGTTACCTAGCTTCTTTGGTGATTTAGGGAAAGGAATGAAGATAGGACTGGTCAACATGGATGAAGAAGATGTAAATGAGTTCAACTTGCATGGAGAAATGGTACCAGTTTATTTTGAGAAGGTATCACAGTCTTTCAACTGGACAGACTTGTTTCCCGAATGGATAGACGAGGAAGAAGAGAGTGACGTGGCGTCATGCCCGGAGATACCTATGCCGGAGTATGCAGAATATGGGAGCATGGACGTCATTGTGGCCAAGATGCCATGCAAGTACCCTGAAAAGGGGTGGGGTAGGGACGTTTTCCGGTTGCAGGTTCATCTAATAGCAGCGAATCTGGCGGCAAAGAAGGGGAAGAGGGATTATTGGAGATGGAAGAAGACAACGAGGGTGGTTCTGTGGAGCAAGTGTAGGCCAATGATGGAGCTGTTCCCATGCGACCAATTGGAGAGGAGGGAAGGTGAGTGGTGGTATTACAAAGCGGACGTGAAGAAGTTGGAGGAGAAGGTTTCGTTGCCTGTTGGGTCCTGCAACTTGGCTTTGCCTCTTTGGGAACAAGGTATCGATGAGGTTTACGACGTGTCCAAGATCCAAAGAAGTGTGAAATCCAGATCAAGAAAAAACCGCGAGGCCTACGCCACCGTGCTCCATTCCTCCGAAGCCTACGTTTGCGGCGCCATAACTCTCGCTCAGAGCCTCATCCAAACGGGAACCAAACGCGACCTTGTTCTCCTCATCGACAACTCAATCTCCGCCCCGAAACGCCGCGCACTCGCCTCCGCAGGCTGGAAGATTCGAATCATAACACGAATCCGAAACCCTAGGGCCGAGAAAGGAACCTACAACGAGTATAACTACAGCAAGTTTCGCCTATGGCAGCTCACGGACTACGACAAAATCATCTTCATCGACTCCGATATCATCGTGCTCCGGAACCTGGACATACTCTTCCACTTCCCTCAGATCTCGGCGACGGGGAATGACCAGACAATATTCAACTCGGGGATCATGGTGATCGAGCCTTCGAACTGCACGTTCGCGACGTTGATGAGCCTCCGAGACGACATCGTTTCGTACAACGGAGGTGACCAAGGGTTCCTGAACGAGGTTTTCGTGTGGTGGCACAGGTTACCGAGGAGGGTGAACTTCTTGAAGAACTTCTGGTCGAATTCGACGCTGGAGAGGAGGGTGAAGAACGGTTTGATCGGTTCGGAGACGGCGGAGGTGTACGCCGTACACTACTTAGGGTGGAAGCCGTGGCAGTGTTACAGGGACTATGATTGCAACTGGGACGTGGAGGAGCAATTGGTGTACGCGAGTGACGTGGCGCACAGGAGGTGGTGGAAGGTGCACGACGCCATGGATGAAGAGATGCAGAGGATGTGCAGGCTCACGAAACGGCGTCGTACTGAGCTCAATTGGGAAAGAAGGAAAGCGAGGAAAAAGGGCTTGGTGAATGGGCATTGGAAGATCAATATTACGGATCCTAGACGATTTGGCTCTCTTTTGATTCATTAG 1773 0.4986 MVKTIPSKAKVSIINLVFLAVFLVVYGTLLLRPSSSLYFENAASLVRCSLRECRHKVEKSFKMKAVLEEPQRERSSKKNNATNKIELPSFFGDLGKGMKIGLVNMDEEDVNEFNLHGEMVPVYFEKVSQSFNWTDLFPEWIDEEEESDVASCPEIPMPEYAEYGSMDVIVAKMPCKYPEKGWGRDVFRLQVHLIAANLAAKKGKRDYWRWKKTTRVVLWSKCRPMMELFPCDQLERREGEWWYYKADVKKLEEKVSLPVGSCNLALPLWEQGIDEVYDVSKIQRSVKSRSRKNREAYATVLHSSEAYVCGAITLAQSLIQTGTKRDLVLLIDNSISAPKRRALASAGWKIRIITRIRNPRAEKGTYNEYNYSKFRLWQLTDYDKIIFIDSDIIVLRNLDILFHFPQISATGNDQTIFNSGIMVIEPSNCTFATLMSLRDDIVSYNGGDQGFLNEVFVWWHRLPRRVNFLKNFWSNSTLERRVKNGLIGSETAEVYAVHYLGWKPWQCYRDYDCNWDVEEQLVYASDVAHRRWWKVHDAMDEEMQRMCRLTKRRRTELNWERRKARKKGLVNGHWKINITDPRRFGSLLIH* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2512 590 PANTHER GLYCOGENIN SUBFAMILY MEMBER 1 583 - -
Ahy17g2512 590 SUPERFAMILY Nucleotide-diphospho-sugar transferases 295 544 IPR029044 -
Ahy17g2512 590 CDD GT8_Glycogenin 295 539 - -
Ahy17g2512 590 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 292 543 IPR029044 -
Ahy17g2512 590 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 1 583 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Ahy17g2512 590 Pfam Glycosyl transferase family 8 300 403 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2512 Ahy-Chr17 119586191 119590908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2512 83 589 Glycosyltransferase AT4G33330 68.555 0.0 739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2512 17 119586191 119590908 Ahy17g2512 17 119586191 119590908 ECH
Ahy17g2512 17 119586191 119590908 Ahy8g0302 8 6289655 6293655 hybridization
Ahy16g3545 16 153011462 153017215 Ahy17g2512 17 119586191 119590908 PCT
Ahy6g2792 6 113707457 113713210 Ahy17g2512 17 119586191 119590908 PCT
Ahy17g2512 17 119586191 119590908 Ahy16g3545 16 153011462 153017215 PCT
Ahy17g2512 17 119586191 119590908 Ahy6g2792 6 113707457 113713210 PCT