Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2510 ATGAGGAGGATCGGAAGCTACATAACACAGGGCGTTTACACTGTTTCAGGGCCCTTCCACCCGTTCGGCGGCGCCGTCGACATCGTCGTCGTGGAGCAGCCAGATGGAACCTTCAAGTCTTCTCCTTGGTACGTCCGATTCGGGAAATTCCAAGGCGTTCTGAAAGCAAGGGAGAAGATCGTTGACATCAATGTGAATGGCATCGACGCTGATTTCCACATGCATCTTGATCACAAAGGTGAAGCTTATTTCCTCAGGGAAGTAGATGCTGAATATGGTGACGCCGTTATTTATCCGTCTTCTGGTGATGAATATGATGATAACCGCTCCCGTCATCTTAACGACATGCAAATACAAGAACGCCTCAGGTCCAAAAGCTGCAACTATGATTCAGAAAATAGTAATGGGAATGCTGGGACAAGGTCTCGCGGCTCGTTACTGGGCTTTGTGTTTGGGCGAAAGTCCATAGAGGAAGGTGAAGAATGTGGTGATAAGTACGGAGTTGAACAAATGGCGCCTGCTGAGATAGCTGCAGATTTGTTGGAGCTTAAGTGGTCTACGAATATCAAAAGTGATCGCCGACCACCACGTTTTGTGGATAAACGCAAAATTGCAAAGAGTTCATCCGATGGTGATGTACTTCAAGAAGCTTTGCCACCTCTTGCGGTAAAGGAGGAAGAAGCTTCTTCTTTTTCCAATTCTAACTCTGAGCATGGACATGATAAGACTATGATAAAGATTGACGTTGCGCATGAGGTTGAATGTGACTCCAATGGAAAGCAAGGTGGACTTGCTCATGAATGTGCTGATTTTCCCGTTGAACTTGTGGAAGTTGAAGCAGGAGGGGGGTTCGAGAGGAAATTAAGTGACGGAGAGCTTGCTCCTGTCAGTGCTTTTGCTTCGCCGACTGGTGTTTCTTCAGTGGACGACAACATTTCGGCTGATGAAGTTGCTCAGTCTGTGGTTTTCTTCGAGACATCGGAGAAAGCGACGGTGGAATGTGCAAACGAGAGTAGTGCAACGAGCCATGATGTCTCTAGCACATTTTCTCCTCCTAAGGATTTGCTTGGTGTACAAGCAACAACTAAATCACCAGCAGCAGGTTTAGTGGAAGAAGAAAACTTCCTTTTTAGTGACCTTGATGAAAGTAAAATCAATGATCAATTGGATAGACCAGTGTCCCCTGAATCCGTAGATAAGGAAGAAGAAGAAGAAGAAGAAGAAGAACATCATTCTTGCGATGATGGCGATGTTAAAGATGAAAACTTAGTTAGTGAAAATGGCGATTTGCATTCGTCCAGTCCTATGGCTATCCCTAGAACTGAGGCTGCTGGGGAGGATATTGGGCATACAGGATCATTGCCTAACATTACTACTCGTAGCATCAGCTTGGGCCAACCTGAGGCTTCTTATCCTTTAAGTCAATCACTAGACACAAGATCCAAATCCTTGCCGTGGTTATTTCCTGAAAATGAAGATTCAAGTGAAGCCAATGGAAACCAGTTGTCAAATGCGAAGTCAGGGGTCGGTAGCCCACCTTCTGGTTGGAGACTTTGGCCTTTCTCCAGATCAGTATCCCAAACATATGTGCCGCCTATGCCAAGTGATACCAAAGATACTACTTTTGAACAGTCTTCAGAGAATACAATCAGCACAGATCCGAACAAAAATGAGCTCAAGACTGACCCAAAGAAAAAGCATGTTAGGGTAAAAGTTCCAACTTCTGAACAGATAGCATCGCTGCATCTGAAGGAAGGGGGTAATACTGTAATGTTCACTTTCTCTACAGCAATGCTTGGGAGGCAGCAGGTTGATTGTCGAATATATTTATGGAAATGGAATACTCGTATAGTGATCTCAGATGTGGATGGGACAATTACAAAGTCAGATGTTTTAGGTCAATTCATGCCTTTGGTTGGTATTGATTGGTCACAGACAGGTGTTGCACACTTATTCTCAGCTATCAAGGAGAATGGTTACCAACTGCTATTTCTCAGTGCCCGTTCAATTTCTCAAGCATATCTCACACGCCAGTTCCTATTCAACCTTAAACAGGATGGGAAAGCTCTACCAGATGGTCCTGTTGTTATTTCTCCTGATGGACTTTTTCCATCTCTATATCGTGAAGTTATTAGGAGGGTTCCTCATGAGTTCAAAATTGCATGCCTGGAGGATATCAAGTCACTTTTTCCTTCTGATTGCAATCCATTCTATGCTGGTTTTGGAAATAGGGATACTGATGAAATCAGCTACCTTAAGGTTGGAATCCCAATAGGAAAAATATTCATTATTAATCCCAGGGGAGAGATCGTTGTAAACCGTCGAATTGACACAAAATCGTATACTTCTCTCCATGCACTCGTGAATGGAATGTTCCCCCCAATGATCTCCTCTTCTGAACAGGAGGATTTTAACTCATGGAATTTCTGGAAGCTACCCCCTCCTGTTCTAGACTTGTGA 2460 0.4411 MRRIGSYITQGVYTVSGPFHPFGGAVDIVVVEQPDGTFKSSPWYVRFGKFQGVLKAREKIVDINVNGIDADFHMHLDHKGEAYFLREVDAEYGDAVIYPSSGDEYDDNRSRHLNDMQIQERLRSKSCNYDSENSNGNAGTRSRGSLLGFVFGRKSIEEGEECGDKYGVEQMAPAEIAADLLELKWSTNIKSDRRPPRFVDKRKIAKSSSDGDVLQEALPPLAVKEEEASSFSNSNSEHGHDKTMIKIDVAHEVECDSNGKQGGLAHECADFPVELVEVEAGGGFERKLSDGELAPVSAFASPTGVSSVDDNISADEVAQSVVFFETSEKATVECANESSATSHDVSSTFSPPKDLLGVQATTKSPAAGLVEEENFLFSDLDESKINDQLDRPVSPESVDKEEEEEEEEEHHSCDDGDVKDENLVSENGDLHSSSPMAIPRTEAAGEDIGHTGSLPNITTRSISLGQPEASYPLSQSLDTRSKSLPWLFPENEDSSEANGNQLSNAKSGVGSPPSGWRLWPFSRSVSQTYVPPMPSDTKDTTFEQSSENTISTDPNKNELKTDPKKKHVRVKVPTSEQIASLHLKEGGNTVMFTFSTAMLGRQQVDCRIYLWKWNTRIVISDVDGTITKSDVLGQFMPLVGIDWSQTGVAHLFSAIKENGYQLLFLSARSISQAYLTRQFLFNLKQDGKALPDGPVVISPDGLFPSLYREVIRRVPHEFKIACLEDIKSLFPSDCNPFYAGFGNRDTDEISYLKVGIPIGKIFIINPRGEIVVNRRIDTKSYTSLHALVNGMFPPMISSSEQEDFNSWNFWKLPPPVLDL* 820
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2510 819 SUPERFAMILY HAD-like 609 761 IPR036412 -
Ahy17g2510 819 MobiDBLite consensus disorder prediction 485 513 - -
Ahy17g2510 819 MobiDBLite consensus disorder prediction 532 562 - -
Ahy17g2510 819 SMART lns2 617 773 IPR031315 -
Ahy17g2510 819 PANTHER GH19076P 1 818 - -
Ahy17g2510 819 MobiDBLite consensus disorder prediction 381 437 - -
Ahy17g2510 819 MobiDBLite consensus disorder prediction 335 356 - -
Ahy17g2510 819 PANTHER LIPIN 1 818 IPR026058 -
Ahy17g2510 819 Pfam lipin, N-terminal conserved region 8 92 IPR007651 -
Ahy17g2510 819 MobiDBLite consensus disorder prediction 493 510 - -
Ahy17g2510 819 Pfam LNS2 (Lipin/Ned1/Smp2) 572 793 IPR013209 -
Ahy17g2510 819 MobiDBLite consensus disorder prediction 532 556 - -
Ahy17g2510 819 MobiDBLite consensus disorder prediction 381 398 - -
Ahy17g2510 819 MobiDBLite consensus disorder prediction 412 426 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ahy17g2510 Ahy-Chr17 119546363 119552960 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2510 17 119546363 119552960 Ahy17g2510 17 119546363 119552960 ECH
Ahy17g2510 17 119546363 119552960 Ahy8g0300 8 6268985 6275601 hybridization
Ahy16g3546 16 153052449 153057041 Ahy17g2510 17 119546363 119552960 PCT
Ahy6g2793 6 113748444 113753036 Ahy17g2510 17 119546363 119552960 PCT
Ahy17g2510 17 119546363 119552960 Ahy16g3546 16 153052449 153057041 PCT
Ahy17g2510 17 119546363 119552960 Ahy6g2793 6 113748444 113753036 PCT