Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2508 ATGTCTGGTCATGGTGAACACCATAGCGTTCCCCTTTCGGTGCTGCTGAAGCGCGAATTGGTGAACGAGAAAATCGAGAAGCCGGAGATTGTGTACGGCCAAGCCAGCCAGAGCAAGAAAGGAGAGGATTTTATTCTGCTTAAGAACGAATGCCAGAGGGTCATGGGAGATGGCGTCTCCACATTTTCTGTTTTCGGGCTATTTGATGGTCACAATGGAACTGCTGCTGCTATTTATGCCAAGGAGAATCTTCTAAACAACATTTTAAGTGCAATTCCTTCAGATCTTAACAGAGATGAGTGGATAGCAGCATTGCCCAGGGCTTTGGTTGCAGGATTTGTGAAAACTGACAAAGATTTTCAACAGAAAGCAAAAACATCGGGAACAACTGTAACCTTTGTGATTCTTGAAGGATGGGTGGTAACAGTTGCATCAGTTGGTGATTCGCGTTGCGTACTTGAACCTGCTGAAGGTGGTATTCATTACTTGTCAGCGGATCATAGACTTGAAACCAATGCAGAAGAGAGGGTCCGCATAACCTGTAGCGGGGGTGAGGTTGGCCGGCTAAATACAGGTGGAGGAGCAGAGGTTGGCCCTTTGAGATGTTGGCCTGGTGGCTTGTGTCTTTCGAGATCCATTGGTGATGCGGATGTTGGTGAATTTATTGTTCCTGTACCATATGTAAAGCAAGTGAAGCTTTCTAGTGCCGGAGGAAGGCTTGTTATCAGCAGTGATGGTGTCTGGGACTCTCTAACTCCAGAAGTGGCCTTGGATTGTTGTCGTGGCATGTCAGCAGAGGCTGCAGCACCACAAATTGTGAATGAAGCTTTACAAGCAAAGGGTCTTAGAGATGACACAACTTGCATTGTTGTTGATATATTACCCCAAGAGCAGCCGCATACTTCTGTACGAACTCAAAAGAAACCGATGAAAGGAATTATGAAGATCTTCCGCAAAAAGGGCTCTGAATCATCATCTCATACCAACAAAGAATATGTAGAGCCAGATATTGTACGGGAGCTCTATGAGGAAGGTTCTGCTATGCTTTCAGAGAGGTTAGAGACAAAATATCCACTCTGCAACATGTTCAAGTTGTTTATCTGTGCTGTGTGTCAAGTAGAAATCAAACCAGGGGAGGGTATCTCAATACATGCGGGGAAGACCAACCCCGGAAAATTGCGTCCGTGGGATGGACCTTTTCTTTGCTCAAGTTGCCAAGAGAAGAAGGAAGCCATGGAAGGGTTACGGAAATCAGGAAGACATCGTGGCAGTGACAGTGACGACTAA 1287 0.4592 MSGHGEHHSVPLSVLLKRELVNEKIEKPEIVYGQASQSKKGEDFILLKNECQRVMGDGVSTFSVFGLFDGHNGTAAAIYAKENLLNNILSAIPSDLNRDEWIAALPRALVAGFVKTDKDFQQKAKTSGTTVTFVILEGWVVTVASVGDSRCVLEPAEGGIHYLSADHRLETNAEERVRITCSGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDADVGEFIVPVPYVKQVKLSSAGGRLVISSDGVWDSLTPEVALDCCRGMSAEAAAPQIVNEALQAKGLRDDTTCIVVDILPQEQPHTSVRTQKKPMKGIMKIFRKKGSESSSHTNKEYVEPDIVRELYEEGSAMLSERLETKYPLCNMFKLFICAVCQVEIKPGEGISIHAGKTNPGKLRPWDGPFLCSSCQEKKEAMEGLRKSGRHRGSDSDD* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2508 428 CDD PP2Cc 39 293 IPR001932 -
Ahy17g2508 428 Pfam Protein phosphatase 2C 42 283 IPR001932 -
Ahy17g2508 428 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 3 422 - -
Ahy17g2508 428 PANTHER ALPHABET, ISOFORM E-RELATED 3 422 - -
Ahy17g2508 428 Gene3D - 31 302 IPR036457 -
Ahy17g2508 428 ProSiteProfiles PPM-type phosphatase domain profile. 31 293 IPR001932 -
Ahy17g2508 428 SMART PP2C_4 21 291 IPR001932 -
Ahy17g2508 428 SUPERFAMILY PP2C-like 37 293 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2508 Ahy-Chr17 119537302 119541320 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2508 1 427 PP2C-type Phosphatase Gene Family AT1G47380 77.103 0.0 700
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2508 17 119537302 119541320 Ahy8g0298 8 6259801 6263812 hybridization
Ahy16g3548 16 153073653 153078826 Ahy17g2508 17 119537302 119541320 PCT
Ahy6g2795 6 113769648 113774821 Ahy17g2508 17 119537302 119541320 PCT
Ahy17g2508 17 119537302 119541320 Ahy16g3548 16 153073653 153078826 PCT
Ahy17g2508 17 119537302 119541320 Ahy6g2795 6 113769648 113774821 PCT