Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2490 ATGGACACGAGAAGGAGGACGAGATTAGAGCCTAAGAAAGCTCAGACAGGAGCACATGATGATGATGATGATCATAGAGCAGAGATGCGGGAAAGTTTGGCACAAGGAAAAGGCAGAGCAAGCAGAGACGGAAGGACACGAAGCAAGGAGAGAAAATTGGCCTTGCAACAAGACGTGGAGAGGTTGAAGAAGAAGCTTAGGAACGAAGAGAACATCCACAGGGCATTGCAGAGAGCTTTCAACAGACCCTTGGGTGCTCTCCCTCGTCTTCCTCCTTATCTCCCTCCCAATACCCTGGGACTTCTTGCGGAGGTGGCGGTGCTGGAGGAAGAAATTGCAAGGCTTGAAGAGCAGGTGATGCATTTCAGGCAGGACTTGTATCAAGAAGCTGTATATACATCATCCTCCAAGATGAAAATGGATCATTCATCTCGTTTAGTTAAATTGAAGTCTCCTTCCCCAACAATTACACTTCCCGAGGATAGGCAAGGAAAAGAGAACCAGTCATGTAGTCATTCTCACAAGAACACCAAGCAGTTCAATTCTAAAACTAAAACAACAAAAACTCCTATTAATACACTTCCCCTCCACAACAAACCATGGCATCGTCCAAAGAGACAGACTGTGCAGCAAGAACTAAGAGTGAATGACCAGCCAATGGCAGAACCAACAGATCATGAAGAAAGTCCAAACATAATCTCTGAAAATATTCTCAAGTGCTTATCAAGCATTCTTTTGAGAATGAGTACTGCCAAGTATCCGGATTCTACAGCTGGCATGTTGCGAGATCCGAAATCTCGAAACTGTACTCAAGGAACATGGTTTCAGGATCCATATGGTACTTGTTTAGAATTTGGAGAGATGGATATTGGTCCGTACAAGCAATTCCGTGCAATTGAAGCTGAATCCTTCAGTCCAAAACGAACTGCTAATTCTTTGTTTCTGCAGCATCGGTTGAAGCTTCTTTTGAGGAAACTTTCCTCTGTCAACTTAGAGAATCTCAATCATCAGGAGAAGCTTGCATTCTGGATCAACATATATAACTCTTGTATGATGAATGCATTCAATGAGCATGGCTTACCGGAGAGTCCGGAAACAGTTGTTGCATTGATGCACAAGGCAACAATAAATGTGGGTGGACACTTGCTAAGCGCAACAACGATAGAGCATTGCATTCTAAGGCTTCCTTATCATTGGAAATTGCTGAATTCTAAACAGACATCAAAGGGAGCCAAGAATCATGAAATGACAGTAAGAAGCATATATGGATTGGAATTATCAGAACCCTTGGTGACATTTGCTCTCTCATGTGGAACTTGGTCCTCTCCTGCTGTCAGAGTTTACACAGCATCACAGGTCGAGAACCAACTCGAAGCAGCAAAAAGAGAATACTTGCAGGCTGCAGTTGGAATTTCAACTTCAAAGTTTGCTATCCCAAAGCTGCTAGATTGGTACTTACTGGACTTTGCAAAAGACTTGGAATCTTTGCTGGATTGGATATGCCTCCAATTACCAAGCGAAATAGGGAAAGAAGCCATTAAGTTCCTCGAGAATAGAAAAACCGAACCCCTCTCACAATTTGTACAAATTATGCCATATGAGTTTAGTTTTAGATACTTGCTATGCACATAA 1632 0.4277 MDTRRRTRLEPKKAQTGAHDDDDDHRAEMRESLAQGKGRASRDGRTRSKERKLALQQDVERLKKKLRNEENIHRALQRAFNRPLGALPRLPPYLPPNTLGLLAEVAVLEEEIARLEEQVMHFRQDLYQEAVYTSSSKMKMDHSSRLVKLKSPSPTITLPEDRQGKENQSCSHSHKNTKQFNSKTKTTKTPINTLPLHNKPWHRPKRQTVQQELRVNDQPMAEPTDHEESPNIISENILKCLSSILLRMSTAKYPDSTAGMLRDPKSRNCTQGTWFQDPYGTCLEFGEMDIGPYKQFRAIEAESFSPKRTANSLFLQHRLKLLLRKLSSVNLENLNHQEKLAFWINIYNSCMMNAFNEHGLPESPETVVALMHKATINVGGHLLSATTIEHCILRLPYHWKLLNSKQTSKGAKNHEMTVRSIYGLELSEPLVTFALSCGTWSSPAVRVYTASQVENQLEAAKREYLQAAVGISTSKFAIPKLLDWYLLDFAKDLESLLDWICLQLPSEIGKEAIKFLENRKTEPLSQFVQIMPYEFSFRYLLCT* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2490 543 MobiDBLite consensus disorder prediction 143 205 - -
Ahy17g2490 543 PANTHER TRANSCRIPTION FACTOR 153 542 - -
Ahy17g2490 543 PANTHER TRANSCRIPTION FACTOR 4 146 - -
Ahy17g2490 543 MobiDBLite consensus disorder prediction 1 52 - -
Ahy17g2490 543 Coils Coil 45 79 - -
Ahy17g2490 543 MobiDBLite consensus disorder prediction 148 164 - -
Ahy17g2490 543 Pfam Protein of unknown function, DUF547 332 465 IPR006869 -
Ahy17g2490 543 PANTHER EXPRESSED PROTEIN 153 542 - -
Ahy17g2490 543 PANTHER EXPRESSED PROTEIN 4 146 - -
Ahy17g2490 543 Coils Coil 98 125 - -
Ahy17g2490 543 MobiDBLite consensus disorder prediction 173 194 - -
Ahy17g2490 543 Pfam Leucine-zipper of ternary complex factor MIP1 48 129 IPR025757 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2490 Ahy-Chr17 118916550 118919966 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2490 17 118916550 118919966 Ahy17g2490 17 118916550 118919966 ECH
Ahy17g2490 17 118916550 118919966 Ahy8g0289 8 5953186 5956553 hybridization
Ahy16g3569 16 153331717 153335814 Ahy17g2490 17 118916550 118919966 PCT
Ahy6g2816 6 114027712 114031809 Ahy17g2490 17 118916550 118919966 PCT
Ahy17g2490 17 118916550 118919966 Ahy16g3569 16 153331717 153335814 PCT
Ahy17g2490 17 118916550 118919966 Ahy6g2816 6 114027712 114031809 PCT