Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2480 ATGACGACGACGACGACGACGACTTCAGAAACCACAACCACAGCCACCGCCACCGCCACCGTCCTACTCCCTTCTTCTTCTTCTTCTTCTTCTTCTCCGTCTCAGATGGATTCTTCTAACTATAACAAGCCTTCTTCTTCTTCTACTTTTTATTTTTCTTGTTCAACTGTCTCTTCAGCTGCCGCTGACAGCAAGGGGCAGTCGATTCAGCAGCGGAGGCTTACGAGGCAGAGGAGACTCCGCGACCATGACGCTGCCACCGACACCTATTCCTTGCCGGCTTCTCCTCTCCCTTCTTTCAAGTCCTTCGACTCGCCTCCCGTGCCTCTCCCCCTGCCACGTCCTGACTCCCCGTTGACCCGCCGTCCCGAGTCAACTAGTCCCAATTCCGGTCATCCTTTCTTTGCCACTCCGCGTACCAGAAAGAGTGCGGATCATGATGCAGCTAAAAATGTGAGATCTCCAAGCAATTTGCGCAGAGCATCTTTTGATCCGACGATCCAGAGTGCAAGATATTTAAGGGTCAATATACCATCTACAACGGTGCTATCTGGCAATATTGCATACAAAGATCCCCAAGAACACTCTCATGAGAGTTACTCTGAGACTATTTCTGAGTTGAAACTGCATTATGCTGCCAAGAGTGCCCCAACAAGCGTACTATCCAGTCCTGTTACAAGTCCGCGTAGATCCAGCAACTTAGATTTCTATGATCCTTCCATACATTTTATTCAAGATTTCAATGAAACTTTCAAAGTGTCACCGGCGAAAACACTTCACAGTCCAGACCTTTCTTCCCTTCGCGGCCGCAGTCCCTTCCACACTCCTAATAACATTCGAGAGGGATCTCAGCCTTATAATCTTTGCTCCAAAGAGCGGCCTGAAAACAATGCACATCCATTACCCCTTCCGCCTAAATCTCCATCTCCATCTCCATCACCGGCTCAATCAACTATCATGCATCAAACTTCTGAAATTTCACCCTCCATGAAGAAGGGTCAATGGCAGAAAGGGAAACTCATTGGCCGTGGATCATTTGGAAGTGTTTATCATGCTACCAACCTAGAAACGGGAGCATCGTGTGCAATGAAAGAGGTGGATCTGATTCATGATGATCCTAAGTCTGCTGATTCCTTAAAGCAACTAGAGCAGGAAATCCGAATTCTCCGTCAGCTACACCACCCTAACATTGTGCAGTATTATGGCAGTGAAATAGTTGGTGATCACTTGTACATATATATGGAGTATGTTCATCCTGGATCAATTCATAAATTTATACATGAAAATTGTGGAGCTATGACTGAGTCTGTTGTTCGCAATTTCACTCGGCATATTCTCTCTGGATTGGCATACTTACATAATACAAAGACTATCCACAGGGATATCAAAGGTGCAAACTTGCTGGTTGATGCCTCTGGCATTGTCAAGCTTGCAGATTTTGGGGTGTCAAAGATTCTGACAGAGAAATCATATGAACTTTCATTGAAGGGAAGTCCCTACTGGATGGCTCCAGAGCTTATGATGGCTGCCATAAAGAAAGAATCAAATCCTGACATTGCCATGGCCATCGACATATGGAGCTTAGGGTGCACCATCATTGAAATGCTGACTGGCAGACCTCCTTGGAGCGAGTTTGAAGGGCCTCAAGCAATGTTCAAGGTACTACACAGATCCCCACCTATACCAGAAACTCTATCTTCAGAGGGACAGGATTTCCTTAAGCAGTGTTTCAGAAGGAACCCTGCGGATCGACCAACAGCAGCAACCCTCCTTACACACGCCTTTGTACAAAATTTGCATGATCAAGATGTCCTAATTCATCCACAACAACTCTATCATCCTAAAGGAGACCCGGGACCAAAAGAGAATACACGCAAACGCAATAGCCCAAAACACAATTCAAAATCCAGTCCCAGACACTCCATTGGCTCCAGGATTATTAACAAGATTCATAATATAATCGGTGATAAAAAATATGATAGTGATGAATGTAATCATAGTACATCTTCTGCTGACTCTCCTCACTCCCTGACAGAAGTTAACGCTCGTCAACCTCCCCTGAAACCTACACTCAATTTCATGTCTCTTGCACCATTCAAGGTTATCAAAATCATCAGACACATTTGA 2127 0.4537 MTTTTTTTSETTTTATATATVLLPSSSSSSSSPSQMDSSNYNKPSSSSTFYFSCSTVSSAAADSKGQSIQQRRLTRQRRLRDHDAATDTYSLPASPLPSFKSFDSPPVPLPLPRPDSPLTRRPESTSPNSGHPFFATPRTRKSADHDAAKNVRSPSNLRRASFDPTIQSARYLRVNIPSTTVLSGNIAYKDPQEHSHESYSETISELKLHYAAKSAPTSVLSSPVTSPRRSSNLDFYDPSIHFIQDFNETFKVSPAKTLHSPDLSSLRGRSPFHTPNNIREGSQPYNLCSKERPENNAHPLPLPPKSPSPSPSPAQSTIMHQTSEISPSMKKGQWQKGKLIGRGSFGSVYHATNLETGASCAMKEVDLIHDDPKSADSLKQLEQEIRILRQLHHPNIVQYYGSEIVGDHLYIYMEYVHPGSIHKFIHENCGAMTESVVRNFTRHILSGLAYLHNTKTIHRDIKGANLLVDASGIVKLADFGVSKILTEKSYELSLKGSPYWMAPELMMAAIKKESNPDIAMAIDIWSLGCTIIEMLTGRPPWSEFEGPQAMFKVLHRSPPIPETLSSEGQDFLKQCFRRNPADRPTAATLLTHAFVQNLHDQDVLIHPQQLYHPKGDPGPKENTRKRNSPKHNSKSSPRHSIGSRIINKIHNIIGDKKYDSDECNHSTSSADSPHSLTEVNARQPPLKPTLNFMSLAPFKVIKIIRHI* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2480 708 MobiDBLite consensus disorder prediction 298 312 - -
Ahy17g2480 708 Gene3D Transferase(Phosphotransferase) domain 1 331 636 - -
Ahy17g2480 708 MobiDBLite consensus disorder prediction 1 47 - -
Ahy17g2480 708 MobiDBLite consensus disorder prediction 666 683 - -
Ahy17g2480 708 MobiDBLite consensus disorder prediction 258 291 - -
Ahy17g2480 708 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 38 687 - -
Ahy17g2480 708 SUPERFAMILY Protein kinase-like (PK-like) 307 642 IPR011009 -
Ahy17g2480 708 MobiDBLite consensus disorder prediction 658 683 - -
Ahy17g2480 708 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 38 687 - -
Ahy17g2480 708 MobiDBLite consensus disorder prediction 120 136 - -
Ahy17g2480 708 MobiDBLite consensus disorder prediction 610 645 - -
Ahy17g2480 708 MobiDBLite consensus disorder prediction 313 331 - -
Ahy17g2480 708 MobiDBLite consensus disorder prediction 139 153 - -
Ahy17g2480 708 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524
Ahy17g2480 708 Pfam Protein kinase domain 336 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2480 708 MobiDBLite consensus disorder prediction 59 73 - -
Ahy17g2480 708 MobiDBLite consensus disorder prediction 258 334 - -
Ahy17g2480 708 MobiDBLite consensus disorder prediction 59 156 - -
Ahy17g2480 708 SMART serkin_6 335 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2480 708 ProSiteProfiles Protein kinase domain profile. 335 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy17g2480 708 MobiDBLite consensus disorder prediction 100 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2480 Ahy-Chr17 118522893 118527541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2480 178 598 MAP Kinase Kinase Kinase AT5G66850 51.702 4.64e-147 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy17g2480 Pkinase 1.10E-67 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2480 17 118522893 118527541 Ahy17g2480 17 118522893 118527541 ECH
Ahy17g2480 17 118522893 118527541 Ahy8g0282 8 5823337 5827329 hybridization
Ahy16g3571 16 153345236 153351518 Ahy17g2480 17 118522893 118527541 PCT
Ahy6g2818 6 114041231 114047513 Ahy17g2480 17 118522893 118527541 PCT
Ahy17g2480 17 118522893 118527541 Ahy16g3571 16 153345236 153351518 PCT
Ahy17g2480 17 118522893 118527541 Ahy6g2818 6 114041231 114047513 PCT