Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2444 ATGCCCTCCTCCGACTCCGGCGAAAGCCATCGATCAGCCAAGCCTCACAACACTTCCCTAGCCCCACCGCCGGCCGAGCAAGAGCACCTGCCATGCCCTCCCTGCGACTCTACTAATACCAAGTTCTGCTACTACAACAACTACAAGTTCTCCCAGCCTCGCCACTTCTGCAAGTCCTGCCGCCGCTACTGGACCCACGGCGGCACTCTCCGTGACATCCCCGTCGGCGGTGGAAGCCGTAAAAACGCCAAGTGCTCTCGCACCGTTCCTTCAGCCTCCACCGCCACAACCTCCTCCTCCGCGGGTGCGGCCGTCACCTCGGTTTCTTCTGTGACCCCGCTCACCATGGTTCCCGTGGCCGGGAACAACCACCCCGGAGCACCCGTGCAGTTCGGTGGGAGCTTCACTTCGTTGCTGAGCAACACACAGCAGGGTCCTGGTGGGTTTCTGGCTCTGGGTGGGTTCGGGCTTGGTCTTGGGCCTGGTCTCGAAGATGTTGGATTTGGGATGGGGATGGGGAGAGGCCGTTGGGCTTTCCCGGGCGTGGTGGCGGACGGAGGCAGCATGGGCGGCGGTGTTGCGGGCTTCGATGTTGGGCACACGTGGGGTGAGGGGGAGTGGGGTTACGGGAGTGGGGTGACCGGGAGTGGGGTGAGGGGGTGA 663 0.638 MPSSDSGESHRSAKPHNTSLAPPPAEQEHLPCPPCDSTNTKFCYYNNYKFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKCSRTVPSASTATTSSSAGAAVTSVSSVTPLTMVPVAGNNHPGAPVQFGGSFTSLLSNTQQGPGGFLALGGFGLGLGPGLEDVGFGMGMGRGRWAFPGVVADGGSMGGGVAGFDVGHTWGEGEWGYGSGVTGSGVRG* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2444 220 Pfam Dof domain, zinc finger 28 84 IPR003851 GO:0003677|GO:0006355
Ahy17g2444 220 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 206 IPR045174 GO:0003700|GO:0006355
Ahy17g2444 220 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Ahy17g2444 220 MobiDBLite consensus disorder prediction 1 16 - -
Ahy17g2444 220 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Ahy17g2444 220 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 1 206 - -
Ahy17g2444 220 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2444 Ahy-Chr17 116624957 116625621 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g2444 1 212 C2C2-Dof Transcription Factor Family AT5G66940 45.133 2.33e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy17g2444 zf-Dof 2.30E-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g2444 - - ahf:112786370 331.643