Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2438 ATGGCGAAATCGAGCGCCGACGATGCTGAGCTCCGGCGAGCATGCGAGGCTGCGATTGAGGGGAAGCAGAAGGTGGTGCTTTCGATCAGAGTTGCAAAGACAAGCGGGGGCTCTGCATGGGGTAAATCTTCCAAGCTTGGCCGCCAAATGGCTAAGCCTAGGGTCCTCGCTCTCTCGACAAAACAAAAAGGTCACAGGACGAAAGCGTTTCTTCGAGTTTTGAAGTATTCCAATGGAGGAGTTCTCGAGCCTGCTAAGATATACAAGCTGAAGCACCTTTCAAAAGTGGAAGTTGTAAGAGAGGATCCCAGTGGATGTACATTTACACTGGGATTTGATAACCTGAGAACCAAGAGAACGGCTCCTCCGGAGTGGACAATGCGCAATATTGATGACAGGAATCGCCTCCTGCTTTTGATCTTAAATATCTGCAAAGATATTGGAGGTCGCATTCCTAAGGTTGTTGGCATTGACGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAATACATCCACAGTTTCCACTCAAACCCACACAGAAGTAGATGGTCCTGTTGAATCTGCTGCTATTTTTACGACAGAAACAGAACTGAATGTCAATGTCGAAAAGGAACTTGTCTCCCAGGCAGAGGAAGAGGACATGGAGGCTCTTTTGGGGACTTATGTCATGGGAATTGGTGAAGCAGAGGTATTAACTGAAAGGTTGAAGAGGGAGCTGCAGGCTCTTGAAGCAGCAAATGTCCATGCCATTTTAGAAACTGAACCTTTAATAGATGAGGTATTGAAAGGGATTGAGGCAGCAACGAATTGTGTGGAAGACATGGATGAATGGTTAGGCATGTTCAATGTGAAACTTCGACACATGAGGGAGGATATTGAATCGATCGAAACCCGTAATAACAAGTTGGAATTGCAATCAGTAAATAACAGACGTCTCATGGAGGAGCTTGATGGGCTTCTCCAGATATTGAAAATCCCTCCTGAACATGAAGCATTTTTGACAGGAGATAAATTTGAAGAACAACAAATGCTTCAAAGTACAGGAGCATTGGAGTGGTTGAGTGATGCTATGCGTGGTATCGTTGCAACTAAAGTAGATCCTGTTTATGGAAATATGACAGCTGTTCACGAGAAGCGAGGGGAGCTTCAACTATTAAAGTCTACTTTTGTTTTCAAAGTTACAACATTCTTAAGAAATTATTTCGCTAATTTTGTGGAATTCTTGTTAAAGGATAAAAATAACTTTTCTCAGCGTGGACAGTTGAAAAGACCAGATCATTCTGAACTACGGTACAAGTGCAGGACATATGCACGTCTTTTGCAACATTTAAAGATGCTTGATAAGAACAGCTTGCTTCAATTGAGGAAAAATTATTGCTCTTCTATGAACTTACTTCTTCGCAGGGAGGCCTGTGAGTTTGCTAATGAAATTCGTGCTAATACCAAAGCGCCTAGAAATGTAGCTGTTTGGCTTGATAGCCCTGCAGGTGCTGGTCAGAACGTAAATTCTGCTGACACTTCTGTAGTTTCTGATGCATACACAAGAATGCTCACAGTTTTTATTCCACTTCTGGTTGATGAGTGTTCATTTTTTGCACAATTCATGTGCTTTGAAGTTCCTATACATGCTCCTCCAGGAGGAGTTGATGGAGATGATGATAATGATGATGATTTGGGAATCATGGACATTGACGAGAAAGACGGTAAATCTGGGAAAAATCCTGCAAATCCTCCAAATCCTGAGGAGCTTGCAGCTCTAAATAATTCACTTCAAGATTTGCTTGATGGAATGCAAGAAGACTTCTATAATGTTATAGATTGGGCATTCAAGATCGATCCTCTACGCTGCATATCAATGCACGGAATAACAGAACGCTATCTCTTTGGTCCAAAAGCTGATGCAGCGGGAGTTGTACGCATTTTGCTTGGCGACCTGGAGTCTCGTATATCTATGCAATTCAGCCGTTATGTTGATGAAGCTTGCCATCATATTGAAAAGTTTGAGCGCAATACTCGCCAGACAGGTGTCTTGCCCTACATTCCCAGATTTGCAACCCTTGCAACACGGATGGAGCAGTACATCACAGGACAGTCGAGAGACCTCGTTGACCAAGCATACATGAAATTTGTCACCATAATGTTTGTAACTTTAGAAAAAGTTGCACAAGCAGAGCCAAAATATGCAGATATATTTCTTTTTGAGAATTATGCCGCCTTTCAAAACAGTTTGTATGACCTTGCCAATGTTGTGCCCACTTTGGCCAAGTTTTACCATCAGGCTAGTGAAGCCTACGAGCAAGCTTGCTCACGCCACATTAGTATGATTATCTACTATCAATTTGAACGCCTCTTCCAGTTTGCTCGAAAGATTGAGGACCACATAAGCAATAATGTTCAACTCGAAGAGATTGCTTTCCAAGTTGGGATGTCAAAATCAGATCTACGGAAGACGCTAAAAGCCAGTTTATCTGGGGTGGACAAGTCCGTAGCTGCAATGTACAAGAAATTGCAAAAAAATTTAACTTCGGAGGAACTGCTGCCTTCCTTGTGGGAAAAATGCAAGAAAGATTTCCTTGCTAAGTATGAAAGTTTTGCCTTTCTTGTCGGTAAGATATACCCTACCGAATCAATCCCTTCTATAACAGAGATGAGAGACCTTTTAGCCAACATGTAA 2673 0.425 MAKSSADDAELRRACEAAIEGKQKVVLSIRVAKTSGGSAWGKSSKLGRQMAKPRVLALSTKQKGHRTKAFLRVLKYSNGGVLEPAKIYKLKHLSKVEVVREDPSGCTFTLGFDNLRTKRTAPPEWTMRNIDDRNRLLLLILNICKDIGGRIPKVVGIDVVEMALWAKENTSTVSTQTHTEVDGPVESAAIFTTETELNVNVEKELVSQAEEEDMEALLGTYVMGIGEAEVLTERLKRELQALEAANVHAILETEPLIDEVLKGIEAATNCVEDMDEWLGMFNVKLRHMREDIESIETRNNKLELQSVNNRRLMEELDGLLQILKIPPEHEAFLTGDKFEEQQMLQSTGALEWLSDAMRGIVATKVDPVYGNMTAVHEKRGELQLLKSTFVFKVTTFLRNYFANFVEFLLKDKNNFSQRGQLKRPDHSELRYKCRTYARLLQHLKMLDKNSLLQLRKNYCSSMNLLLRREACEFANEIRANTKAPRNVAVWLDSPAGAGQNVNSADTSVVSDAYTRMLTVFIPLLVDECSFFAQFMCFEVPIHAPPGGVDGDDDNDDDLGIMDIDEKDGKSGKNPANPPNPEELAALNNSLQDLLDGMQEDFYNVIDWAFKIDPLRCISMHGITERYLFGPKADAAGVVRILLGDLESRISMQFSRYVDEACHHIEKFERNTRQTGVLPYIPRFATLATRMEQYITGQSRDLVDQAYMKFVTIMFVTLEKVAQAEPKYADIFLFENYAAFQNSLYDLANVVPTLAKFYHQASEAYEQACSRHISMIIYYQFERLFQFARKIEDHISNNVQLEEIAFQVGMSKSDLRKTLKASLSGVDKSVAAMYKKLQKNLTSEELLPSLWEKCKKDFLAKYESFAFLVGKIYPTESIPSITEMRDLLANM* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2438 890 MobiDBLite consensus disorder prediction 545 581 - -
Ahy17g2438 890 SMART Sec3_PIP2_bind_2 49 147 IPR028258 -
Ahy17g2438 890 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 50 145 IPR028258 -
Ahy17g2438 890 Coils Coil 225 252 - -
Ahy17g2438 890 Coils Coil 285 305 - -
Ahy17g2438 890 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 890 - -
Ahy17g2438 890 PANTHER SEC3/SYNTAXIN-RELATED 1 890 - -
Ahy17g2438 890 Pfam Exocyst complex component Sec3 563 873 IPR019160 GO:0000145|GO:0006887
Ahy17g2438 890 Pfam Exocyst complex component Sec3 228 482 IPR019160 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2438 Ahy-Chr17 116433049 116445340 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2438 17 116433049 116445340 Ahy17g2438 17 116433049 116445340 ECH
Ahy17g2438 17 116433049 116445340 Ahy8g2817 8 51683895 51696037 hybridization
Ahy16g3600 16 153647936 153657875 Ahy17g2438 17 116433049 116445340 PCT
Ahy6g2845 6 114343931 114353870 Ahy17g2438 17 116433049 116445340 PCT
Ahy17g2438 17 116433049 116445340 Ahy16g3600 16 153647936 153657875 PCT
Ahy17g2438 17 116433049 116445340 Ahy6g2845 6 114343931 114353870 PCT