Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2428 ATGTACCACCCTTCATATATTCTTGACTTTGCCTCCCAAACCCTGCACCCCATCCAGCTACTCTTTCTTTTTTCTCCACATTTTTTAATTGATATTTTCATTACTAGAGGGAGACCAAAAGCGTGTTTGAAACCTCATTCTCCACATTCTCCAATTATAAGCCACCTCATAGATCCCAAAATTCAAACCCAGCTCAGAGTCTCACACCCACACGCCATTTTCCATTCTCAAAAGATTAACAAAACTATGCAATCTAGATTAACAAAACCAAAAACATTACTACTCTTCTTCACAGGTCTCTTATTGCTTCCATGTTCATGTTTATGCTCTTCCACCACCAACAAAGCCAAAAACGCCACCATTATTCCCCATCAGTTCAAGGAAGCACCTCAATTCTACAACTCCCCGGACTGCCCCTCCGTCATGGACACCGACAGCGATGACACTAACACCGATACGGACACGGACACGTACATATGCTCGGAGGAAGCAGTACACGTGGCAATGACTCTAGACACAACATACATCCGAGGATCCATGGCTGCAATCCTTTCAGTCCTCCAACACTCTTCCTGCCCACAAAACATCTTCTTCCACTTCGTCTGCTCCTCCAACGCGTCACTCCTACGCGCCGCCATCTCCAACTCCTTCCCTTACCTCAAGTTCCACCTTTATCATTTCGACAACGCCACCGTCTCCGGCCTCATCTCCACCTCAATCCGCTCCGCACTTGACTGCCCTCTTAACTACGCCCGCAGCTACCTTGCCAATCTCCTTCCACTCTGCGTCCGCCGCGTCGTCTACTTGGACTCCGACCTCATACTCGTCGACGACATTGCGAAACTCGCAGCCACCCCACTAGGCCAAACGGCGGTTCTTGCAGCGCCGCAATACTGCAACGCGAATTTCACAGCATACTTCACACAAACATTCTGGTCGAATCCTTCTCTGTCGCTTACATTCGCGAACAGAGAGCCTTGCTACTTCAACACAGGGGTCATGGTGATCGATCTGGATCGGTGGCGCCATGGAGATTACACGAGGAAGATCGAGGAGTGGATGGAGGTGCAGAAGAGGACGAGGATCTACGAGCTTGGTTCTCTGCCACCGTTTCTTCTTGTTTTCGCTGGAAATATTGCTACTGTGGATCATAGGTGGAACCAGCATGGTTTGGGTGGTGACAATTTTCGTGGTTTGTGCAGAGATCTGCACCCTGGTCCTGTGAGTTTGTTGCATTGGAGTGGCAAAGGTAAGCCATGGGTGAGGTTGGACGCTAATAGGCCTTGCCCTTTGGATGCTCTTTGGGCACCTTATGATCTGTTGCTCACTCCATTTTCTCTTGATTCTTGA 1350 0.4896 MYHPSYILDFASQTLHPIQLLFLFSPHFLIDIFITRGRPKACLKPHSPHSPIISHLIDPKIQTQLRVSHPHAIFHSQKINKTMQSRLTKPKTLLLFFTGLLLLPCSCLCSSTTNKAKNATIIPHQFKEAPQFYNSPDCPSVMDTDSDDTNTDTDTDTYICSEEAVHVAMTLDTTYIRGSMAAILSVLQHSSCPQNIFFHFVCSSNASLLRAAISNSFPYLKFHLYHFDNATVSGLISTSIRSALDCPLNYARSYLANLLPLCVRRVVYLDSDLILVDDIAKLAATPLGQTAVLAAPQYCNANFTAYFTQTFWSNPSLSLTFANREPCYFNTGVMVIDLDRWRHGDYTRKIEEWMEVQKRTRIYELGSLPPFLLVFAGNIATVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLLTPFSLDS* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2428 449 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 107 449 - -
Ahy17g2428 449 Pfam Glycosyl transferase family 8 166 422 IPR002495 GO:0016757
Ahy17g2428 449 SUPERFAMILY Nucleotide-diphospho-sugar transferases 165 440 IPR029044 -
Ahy17g2428 449 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 166 429 IPR029044 -
Ahy17g2428 449 PANTHER HEXOSYLTRANSFERASE 107 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2428 Ahy-Chr17 116182122 116184117 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2428 17 116182122 116184117 Ahy17g2428 17 116182122 116184117 ECH
Ahy15g0739 15 9959476 9961133 Ahy17g2428 17 116182122 116184117 ECH
Ahy17g2428 17 116182122 116184117 Ahy8g2813 8 51644338 51646349 hybridization
Ahy16g3609 16 153776134 153778030 Ahy17g2428 17 116182122 116184117 PCT
Ahy6g2855 6 114472129 114474025 Ahy17g2428 17 116182122 116184117 PCT
Ahy17g2428 17 116182122 116184117 Ahy16g3609 16 153776134 153778030 PCT
Ahy17g2428 17 116182122 116184117 Ahy6g2855 6 114472129 114474025 PCT