Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2376 ATGATGAAGCAGTGGTTCTTTGGAGCTGGTTTGTTGGTTCTGTTAGTGGCAGTTGAAGTAGAAGCAGATGGTTTTGTGAAGACAAGAGGGGTGCAGCTTGTGCTGAATGGTAGCCCCTACTATGCCCATGGTTTCAATGCTTACTGGCTCATGTACATGGCCTCTGATCCATCTCAGAGGACCAAGGTCTCCTCTACATTTCAAGAGGCTTCAAATAATGGCCTTAACATTGCAAGAACTTGGGCTTTCAGTGATGGTGGATATAAACCTCTTCAATACTCTCCTGGTTCTTATAATGAGCAAATGTTCCAGGGGTTGGACTTTGTAATAGCGGAAGCCGGAAAATATGGGATAAAGCTTGTGTTGAGTTTGGTGGATAACTATGAGAATTTTGGAGGGAAGAAGCAATATGTGGAGTGGGCAAGGAATGAGGGTGGACAGTCCATTTATTCTGAGGACGATTTCTTCACAAATTCAGTTGTTAAGGGATACTACAAAAATCATATCAAGACTGTACTTACAAGACGTAACAGCATCACTGGTGTTGCTTACAAAGATGACCCAACCATAATGGCTTGGGAGCTTATGAACGAGATTAGGTGCAAATCAGATCAATCAGGAAATACAGTTCAGGGTTGGATTAGTGAGATGGCATCTTACTTGAAATCCATAGATGGAAACCACTTGCTAGAAGCTGGTCTTGAGGGTTTCTATGGTCAATCAAAGAGTGACTCTAATCCCAACTTCCAAGTTGGAACAGATTTTATTGCTAATAACCAAATCCCCGCCATTGATTTTGCAACAGTCCACGCCTACCCTGATCAATGGTTATCAAGCTCAAGCTATGAAGATCAAATATCTTTCTTGGGAAAGTGGCTAAATGAGCACATCCAAGATGCACAAAACACCCTTCACAAGCCAATACTAGTTGGGGAGTTTGGTGTTTCAACAAAGAGTTTTGGTTCTAACTTAGAACCAAGGGAAAGGTTTTACAACACCGTGTATTCTGCCATATACTCATCGGCAAGTGGTGGTGGTGCCGCTGTTGGCGGCTTGTTCTGGCAACTTCTGGCTCAAGGACTGGATTCGTTCCGAGACGGTTATGAGGTTGTGTTAGATGAGAACCCCTCCATGGCTGCTTTGATCTCTCAAGAGTCTCAGAAGCTGAACCGAATTCGCAAGATGTATGCCAGACTTAGAAACATTGAGAAATGGAACAAAGCAAGGGAAATCAGAAGCTCACAATGGCATGGTGGCTCTGATGCCAGAAACTGA 1275 0.4345 MMKQWFFGAGLLVLLVAVEVEADGFVKTRGVQLVLNGSPYYAHGFNAYWLMYMASDPSQRTKVSSTFQEASNNGLNIARTWAFSDGGYKPLQYSPGSYNEQMFQGLDFVIAEAGKYGIKLVLSLVDNYENFGGKKQYVEWARNEGGQSIYSEDDFFTNSVVKGYYKNHIKTVLTRRNSITGVAYKDDPTIMAWELMNEIRCKSDQSGNTVQGWISEMASYLKSIDGNHLLEAGLEGFYGQSKSDSNPNFQVGTDFIANNQIPAIDFATVHAYPDQWLSSSSYEDQISFLGKWLNEHIQDAQNTLHKPILVGEFGVSTKSFGSNLEPRERFYNTVYSAIYSSASGGGAAVGGLFWQLLAQGLDSFRDGYEVVLDENPSMAALISQESQKLNRIRKMYARLRNIEKWNKAREIRSSQWHGGSDARN* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2376 424 PANTHER - 17 413 IPR045053 GO:0004553
Ahy17g2376 424 Gene3D Glycosidases 21 393 - -
Ahy17g2376 424 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE-LIKE PROTEIN 17 413 - -
Ahy17g2376 424 Pfam Cellulase (glycosyl hydrolase family 5) 55 329 IPR001547 GO:0004553|GO:0071704
Ahy17g2376 424 SUPERFAMILY (Trans)glycosidases 25 377 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2376 Ahy-Chr17 114336016 114338777 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2376 17 114336016 114338777 Ahy17g2376 17 114336016 114338777 ECH
Ahy15g0825 15 11736563 11738750 Ahy17g2376 17 114336016 114338777 ECH
Ahy17g2376 17 114336016 114338777 Ahy8g0050 8 805190 808007 hybridization
Ahy16g3676 16 154688298 154693729 Ahy17g2376 17 114336016 114338777 PCT
Ahy6g2923 6 115384293 115389724 Ahy17g2376 17 114336016 114338777 PCT
Ahy17g2376 17 114336016 114338777 Ahy16g3676 16 154688298 154693729 PCT
Ahy17g2376 17 114336016 114338777 Ahy6g2923 6 115384293 115389724 PCT