Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2336 ATGGGAACCAGTACTTCAGTTTCAAAGATGCTAATGATGTTGGTAACTGTCTTCTATTTGGGTTTTGAGGTGATCCATTGCAATGTGACCTATGATAGGAAGTCCCTTCTCATCAATGGCCGAAGGAGAATCCTCATATCTGGCTCCATTCACTACCCAAGAAGTACCCCCCAAATGTGGGAGGATCTAATCCGAAAGGCCAAGCACGGAGGCCTTGATGTTATAGACACTTATGTCTTCTGGAATGTCCATGAACCTTCCCCTGGCAAGTACAATTTTGAAGGAAGATATGATCTAGTAAACTTCATTAAGACAGTGCAGAAAGTGGGGCTTTATGTCAATCTTCGCATTGGTCCTTATGTATGCGCTGAGTGGAACTTTGGAGGATTACCTGTTTGGTTGAAGTATGTTCCTGGAATTAGCTTCAGAACGGATAATGGGCCGTTCAAGGCAGCAATGCAAAGTTTCACCCAAAAAATTGTCCAGATGATGAAGAGTGAAAATTTGTTTCAATCTCAGGGTGGTCCAATCATTCTTTCTCAGATTGAGAACGAGTACGGTCCGGAGAGGAGGGCAATGGGAGCTGCTGGCCATGCATACATAAACTGGGCTGCAAAGATGGCTGTTGGATTGGGAACTGGTGTCCCTTGGGTCATGTGCAAGGAAACTGATGCCCCTGATCCTGTGATAAATTCATGTAATGGCTTCTACTGTGATGATTTCTCTCCAAATAAACCATACAAGCCTACCCTCTGGACTGAGTCTTGGAGTGGCTGGTTTACTGAATTTGGTGGTCCAATACATCAGCGACCGGTTGAGGATCTAGCATTTGCGGTTGCACGTTTCATACAAAAGGGTGGCTCATATGTTAATTATTACATGTACCATGGAGGAACTAACTTTGGACGTTCAGCTGGAGGCCCATTTATTACTACAAGCTATGACTATGATGCTCCAATTGATGAATTTGGTTTGACTAGACAACCAAAATATAATCATTTGAAGGATCTTCACAAAGCTATCAAACGATGTGAGCATGCTTTAGTTTCTTCGGATCCCACTGTTACTTCATTAGGAGCATATCAGCAGGCTCATGTGTTCTCTTCAGGGAATGGAGTATGTGCTGCTTTTCTAGCCAATTATCATGCACAATCTTCTGCAAAGGTGATGTTCAATAACAAGAACTATGACTTACCTCCTTGGTCCATAAGCATCCTCCCTGATTGCATAACCGATGTGTTCAACACTGCCAAAGTGAGAGTTCATGATTCAAAGGTAATAATGCTGCCTATCATTCACAAGTCATTATCATGGGAGACCTATGATGAAGATCTATCTTCTCTGGCTGAAAGTTCAAGGATGGCTTCTCCCGGACTCTTGGAACAGCTTAATGTTACTAGAGACACCAGTGATTACCTATGGTACATAACCAACATGGACATAAGTTCAACAGAATCATTTCTTAGAGGAGGAAATAAACCAAGCATTAGTGTGCAATCTGCAGGACATGCTGTCCATGTGTTTGTAAATGGACAATTTTCAGGGTCGGCTTTTGGGACTAGGGAACAGAGAAGTTGCACATTTAATGGCCCCATCAACCTACGTGCTGGAACAAACAAAATAGCACTTCTCAGTGTAACTGTTGGATTACCGAACGTTGGCCGGCATTATGAGACATGGGAGACAGGGATCACTGGTCCAGTTTTGCTCCATGGTCTTGATCATGGACAGCAAGATCTGTCATGGAATGGATGGTCATACCAGATTGGACTAAAAGGAGAAGCTGTGAATTTGGTCTCTCCTGATGGGGTCTCATCTATTGATTGGTTCCAAGAGTCTCTAGCTAACCAAAAACAATCTCAATTGAAATGGCACAAGGCTTATTTCGATGCACCGGATGGAAATGAACCATTGGCTTTGGACATGGGAAGCATGGGAAAGGGTCAAGTATGGATTAATGGAGAAAGCATAGGCAGATATTGGATGACTTATGCAAATGGTGGATGCAATTCTTGCAGCTATCCTGGGCCATTCCGCCCCGCTGTCAAGTGCCAACTTGGCTGCGGACAACCCACCCAACGATGGTACCACGTGCCTAGGTCCTGGCTAAAGGCAACAAAGAACTTGATAGTGGTGTTTGAAGAATTAGGTGGAAATCCATGGAAGATATCGCTGGCAAAGAGAACTGTACATACTCATCATGCTGCAGCTAGTGAAGACCCCAATTCAAATAACTGA 2238 0.437 MGTSTSVSKMLMMLVTVFYLGFEVIHCNVTYDRKSLLINGRRRILISGSIHYPRSTPQMWEDLIRKAKHGGLDVIDTYVFWNVHEPSPGKYNFEGRYDLVNFIKTVQKVGLYVNLRIGPYVCAEWNFGGLPVWLKYVPGISFRTDNGPFKAAMQSFTQKIVQMMKSENLFQSQGGPIILSQIENEYGPERRAMGAAGHAYINWAAKMAVGLGTGVPWVMCKETDAPDPVINSCNGFYCDDFSPNKPYKPTLWTESWSGWFTEFGGPIHQRPVEDLAFAVARFIQKGGSYVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEFGLTRQPKYNHLKDLHKAIKRCEHALVSSDPTVTSLGAYQQAHVFSSGNGVCAAFLANYHAQSSAKVMFNNKNYDLPPWSISILPDCITDVFNTAKVRVHDSKVIMLPIIHKSLSWETYDEDLSSLAESSRMASPGLLEQLNVTRDTSDYLWYITNMDISSTESFLRGGNKPSISVQSAGHAVHVFVNGQFSGSAFGTREQRSCTFNGPINLRAGTNKIALLSVTVGLPNVGRHYETWETGITGPVLLHGLDHGQQDLSWNGWSYQIGLKGEAVNLVSPDGVSSIDWFQESLANQKQSQLKWHKAYFDAPDGNEPLALDMGSMGKGQVWINGESIGRYWMTYANGGCNSCSYPGPFRPAVKCQLGCGQPTQRWYHVPRSWLKATKNLIVVFEELGGNPWKISLAKRTVHTHHAAASEDPNSNN* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2336 745 Pfam Glycosyl hydrolases family 35 35 340 IPR031330 -
Ahy17g2336 745 SUPERFAMILY (Trans)glycosidases 28 345 IPR017853 -
Ahy17g2336 745 Pfam Beta-sandwich domain in beta galactosidase 348 419 IPR041392 -
Ahy17g2336 745 Gene3D Glycosidases 22 344 - -
Ahy17g2336 745 PANTHER BETA-GALACTOSIDASE 4 734 - -
Ahy17g2336 745 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Ahy17g2336 745 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Ahy17g2336 745 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Ahy17g2336 745 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Ahy17g2336 745 PRINTS Glycosyl hydrolase family 35 signature 251 266 IPR001944 GO:0004553|GO:0005975
Ahy17g2336 745 PRINTS Glycosyl hydrolase family 35 signature 647 663 IPR001944 GO:0004553|GO:0005975
Ahy17g2336 745 PRINTS Glycosyl hydrolase family 35 signature 288 303 IPR001944 GO:0004553|GO:0005975
Ahy17g2336 745 PRINTS Glycosyl hydrolase family 35 signature 308 324 IPR001944 GO:0004553|GO:0005975
Ahy17g2336 745 PRINTS Glycosyl hydrolase family 35 signature 620 634 IPR001944 GO:0004553|GO:0005975
Ahy17g2336 745 SUPERFAMILY Galactose-binding domain-like 582 734 IPR008979 -
Ahy17g2336 745 SUPERFAMILY Galactose-binding domain-like 403 574 IPR008979 -
Ahy17g2336 745 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 174 186 IPR019801 GO:0004553|GO:0005975
Ahy17g2336 745 PANTHER BETA-GALACTOSIDASE RELATED 4 734 IPR001944 GO:0004553|GO:0005975
Ahy17g2336 745 Gene3D - 604 735 - -
Ahy17g2336 745 Gene3D - 440 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2336 Ahy-Chr17 112807539 112812409 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2336 17 112807539 112812409 Ahy17g2336 17 112807539 112812409 ECH
Ahy16g0105 16 1021466 1028951 Ahy17g2336 17 112807539 112812409 ECH
Ahy17g2336 17 112807539 112812409 Ahy8g0081 8 1400888 1405475 hybridization
Ahy16g0105 16 1021466 1028951 Ahy17g2336 17 112807539 112812409 PCT
Ahy6g1239 6 18468796 18474136 Ahy17g2336 17 112807539 112812409 PCT
Ahy17g2336 17 112807539 112812409 Ahy16g0105 16 1021466 1028951 PCT
Ahy17g2336 17 112807539 112812409 Ahy6g1239 6 18468796 18474136 PCT