Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2335 ATGGCGGAGGAAGGAGTAGTGATTGGTTGCCACAGCGTGGATGAGTGGAAGGATCAGCTCAAGAAGGCAGAAGACTCCAACAAACTGGTTGTAGTGGATTTCACAGCTTCTTGGTGTGGGCCGTGCCGCTTCATTGCCCCAATTGTGGCGGAGTTTGCTAAGAAGTTCACAAATGTGGCGTTCCTGAAGGTGGATGTGGATGAATTGAAGACTGTGGCTGAGGAGTGGGGAATTGAGGCGATGCCAACCTTCCTCTTCATCAAACAAGGTAAATTAGTAGACAAGGTCGTTGGTGCTAAGAAGGATGAACTTCAATCCACTATCACCAAGCATGTTGCTGCTGCTGCTTGA 351 0.49 MAEEGVVIGCHSVDEWKDQLKKAEDSNKLVVVDFTASWCGPCRFIAPIVAEFAKKFTNVAFLKVDVDELKTVAEEWGIEAMPTFLFIKQGKLVDKVVGAKKDELQSTITKHVAAAA* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2335 116 PRINTS Thioredoxin family signature 38 47 - -
Ahy17g2335 116 PRINTS Thioredoxin family signature 30 38 - -
Ahy17g2335 116 PRINTS Thioredoxin family signature 77 88 - -
Ahy17g2335 116 CDD TRX_family 18 108 - -
Ahy17g2335 116 PANTHER THIOREDOXIN 1 114 - -
Ahy17g2335 116 TIGRFAM thioredoxin: thioredoxin 22 111 IPR005746 GO:0015035
Ahy17g2335 116 Gene3D Glutaredoxin 1 115 - -
Ahy17g2335 116 PANTHER THIOREDOXIN 1 114 - -
Ahy17g2335 116 ProSiteProfiles Thioredoxin domain profile. 1 113 IPR013766 -
Ahy17g2335 116 SUPERFAMILY Thioredoxin-like 8 113 IPR036249 -
Ahy17g2335 116 Pfam Thioredoxin 11 109 IPR013766 -
Ahy17g2335 116 ProSitePatterns Thioredoxin family active site. 31 49 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2335 Ahy-Chr17 112805895 112806683 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2335 17 112805895 112806683 Ahy17g2335 17 112805895 112806683 ECH
Ahy17g2335 17 112805895 112806683 Ahy8g0082 8 1408677 1409502 hybridization
Ahy16g0104 16 1019910 1021326 Ahy17g2335 17 112805895 112806683 PCT
Ahy6g1240 6 18474338 18475284 Ahy17g2335 17 112805895 112806683 PCT
Ahy17g2335 17 112805895 112806683 Ahy16g0104 16 1019910 1021326 PCT
Ahy17g2335 17 112805895 112806683 Ahy6g1240 6 18474338 18475284 PCT