Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2330 ATGGCTGATTCAGGATCCTCATCGTCAAGGAGGATGTGGTGCTCCATCCCAGAGAAGCTTCAACTACATGGTGCCATGCTGGCACTCCAGTTTGGCTATGCTGGCTTTCATGTTGTCTCAAGAGCTGCCCTTAACATGGGCGTTAGCAAACTTGTCTTCCCAGTCTACCGCAACATCATTGCTTTTCTCCTCCTCCTTCCCTTTGCATACTTCTTGGAGAAGAAGGAGAGGCCTGCCATTACTTTAAACTTCTTGCTGCAGTTCTTTCTTCTGGCACTTGTTGGGATTACAGCGAACCAAGGGTTTTACTTGCTGGGATTGGACAACACATCTCCAACATTTGCATCTGCAATACAGAACTCTGTCCCAGCCATTACATTTCTCATGGCAGCCATACTCAGGATAGAGAAAGTGCGGCTCGACAGAAAAGATGGCGTGGCAAAGGTAGCCGGAACAGTATTCTGTGTGGCGGGGGCGTCCGTCATAACACTCTACAAGGGTCCAACCATCTACAGCCCAGAACCACCGCTGCAGACCGCAGCCATGAGCTTAGGGGCGGCAGCAGAAGAGGGAAAGAACTGGACCCTGGGATGTGTCTACCTCATTGGCCATTGCTTGTCTTGGTCCGGTTGGCTCGTCCTGCAGGCTCCGGTTCTGAAGAAGTACCCGGCTCGGCTCTCCGTGACTTCCTACACGTGCTTCTTTGGACTGTTGCAATTCCTTGCCATTGCTCTGGTGGTTGAAAGAGATGTGAATGCTTGGATTTTCCAATCAGGTGCTGAAGTCTTCACTATTGTATACGCGGGAGTGGTTGCTTCCGGCATAGCCTTTGCGGTGCAGATATGGTGCATTGACAGAGGTGGCCCTGTGTTCGTGGCGGTGTATCAGCCAGTCCAGACTCTTGTCGTCGCTGTCATGGCTTCCCTTGCTTTGGGTGAACAGTTCTACTTAGGCGGGATCATTGGAGCAGTTTTGATCGTAGTGGGTCTGTACCTAGTCCTGTGGGGTAAATCCGAAGAGAAGAAATTTGCATCTCAATCGCAACATGTCATTGCTTCTGGTCCAGAGCACAGTAGCATCAGGCCCGCAAGCCATGCCAAACCATCTCTTACTCAGCCTCTTCTTCCTTCCTCAACGGAAAATGTTTGA 1149 0.5083 MADSGSSSSRRMWCSIPEKLQLHGAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIAFLLLLPFAYFLEKKERPAITLNFLLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAAILRIEKVRLDRKDGVAKVAGTVFCVAGASVITLYKGPTIYSPEPPLQTAAMSLGAAAEEGKNWTLGCVYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLLQFLAIALVVERDVNAWIFQSGAEVFTIVYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVVAVMASLALGEQFYLGGIIGAVLIVVGLYLVLWGKSEEKKFASQSQHVIASGPEHSSIRPASHAKPSLTQPLLPSSTENV* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2330 382 PANTHER WAT1-RELATED PROTEIN 14 358 IPR030184 GO:0016021|GO:0022857
Ahy17g2330 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 239 338 - -
Ahy17g2330 382 MobiDBLite consensus disorder prediction 364 382 - -
Ahy17g2330 382 PANTHER WAT1-RELATED PROTEIN 14 358 - -
Ahy17g2330 382 MobiDBLite consensus disorder prediction 354 382 - -
Ahy17g2330 382 Pfam EamA-like transporter family 196 334 IPR000620 GO:0016020|GO:0016021
Ahy17g2330 382 Pfam EamA-like transporter family 27 163 IPR000620 GO:0016020|GO:0016021
Ahy17g2330 382 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2330 Ahy-Chr17 112395814 112398467 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2330 17 112395814 112398467 Ahy17g2330 17 112395814 112398467 ECH
Ahy17g2330 17 112395814 112398467 Ahy8g0088 8 1491210 1493913 hybridization
Ahy16g0101 16 991593 995776 Ahy17g2330 17 112395814 112398467 PCT
Ahy6g1244 6 18503868 18506946 Ahy17g2330 17 112395814 112398467 PCT
Ahy17g2330 17 112395814 112398467 Ahy16g0101 16 991593 995776 PCT
Ahy17g2330 17 112395814 112398467 Ahy6g1244 6 18503868 18506946 PCT