Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2326 ATGGCTCGCCACTCACGCTGGACTCTCCTCCTGCTCCTCCTCTCTGCTGCCGTCGTGTCGGCGGTGATTGACGATGACGATAACATTCTGATCCGTCAAGTGGTGGAGGATGGCGATGAGCACTTGCTGAACGCGGAGCACCACTTCTCCGCCTTCAAGACCAAGTTCAGCAAGACGTACGCCACAAAAGAGGAGCACGACTATCGGTTTGGCGTGTTCAAGAGCAACTTGCTCCGAGCAAAGTCGCATCAGGAGCTGGACCCCTCCGCCATACACGGCGTCACAAAGTTCTCCGATCTCACTCCGTCAGAGTTCCGCAGCCAGTTCCTTGGCCTTAAACCTCTTAGCCTTCCCTCTGATGCTCACAACGCACCAATCCTCCCTACCGACAATCTCCCTAAAGACTTCGACTGGCGCGACCATGGAGCCGTCACTAACGTCAAGAACCAGGGCACGTGTGGGTCGTGTTGGTCCTTTAGCACCACAGGAGCGTTGGAAGGAGCTCATTTTCTGGCAACGGGTGAGCTAGTGAGCCTTAGTGAGCAACAGCTTGTGGATTGCGATCACGAGTGTGATCCAGACCTAAATGATGCATGTGACTCGGGCTGCAATGGGGGGTTGATGACCACTGCATTTGGGTACACAAAGAAGGCTGGTGGACTAGTGCGAGAAGAGGACTATCCTTACACTGGAAGAGATCGTGGCCCTTGCAAATTTGACAAGAGCAAAATTGCTGCTTCTGTGTCCAATTTCAGTGTGGTTTCCCTAGATGAAGACCAAATTGCAGCAAACCTGGTGAAGAATGGTCCTCTTTCAGTTGGTATCAATGCAGTTTATATGCAGACATATATAGGAGGAGTCTCATGCCCATTCATCTGTGGCAAGCACTTGGATCATGGGGTTCTTCTAGTGGGCTATGGTGCTGGTGGTTATGCTCCCATTCGCTTTAAGGAAAAGCCTTATTGGATTATAAAGAACTCATGGGGTGAAAACTGGGGAGAGAATGGATATTACAAGATCTGCAGAGGTCACAATATGTGTGGGGTGGATTCCATGGTCTCAACTGTTACTGCTATTCACACATCTAGCCATTAA 1095 0.5068 MARHSRWTLLLLLLSAAVVSAVIDDDDNILIRQVVEDGDEHLLNAEHHFSAFKTKFSKTYATKEEHDYRFGVFKSNLLRAKSHQELDPSAIHGVTKFSDLTPSEFRSQFLGLKPLSLPSDAHNAPILPTDNLPKDFDWRDHGAVTNVKNQGTCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHECDPDLNDACDSGCNGGLMTTAFGYTKKAGGLVREEDYPYTGRDRGPCKFDKSKIAASVSNFSVVSLDEDQIAANLVKNGPLSVGINAVYMQTYIGGVSCPFICGKHLDHGVLLVGYGAGGYAPIRFKEKPYWIIKNSWGENWGENGYYKICRGHNMCGVDSMVSTVTAIHTSSH* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2326 364 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 297 307 IPR025660 -
Ahy17g2326 364 SMART pept_c1 132 357 IPR000668 GO:0006508|GO:0008234
Ahy17g2326 364 Pfam Cathepsin propeptide inhibitor domain (I29) 49 105 IPR013201 -
Ahy17g2326 364 PANTHER CYSTEINE PROTEASE RD19C-RELATED 23 358 - -
Ahy17g2326 364 CDD Peptidase_C1A 133 356 IPR039417 -
Ahy17g2326 364 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 23 358 - -
Ahy17g2326 364 PRINTS Papain cysteine protease (C1) family signature 150 165 IPR000668 GO:0006508|GO:0008234
Ahy17g2326 364 PRINTS Papain cysteine protease (C1) family signature 321 327 IPR000668 GO:0006508|GO:0008234
Ahy17g2326 364 PRINTS Papain cysteine protease (C1) family signature 299 309 IPR000668 GO:0006508|GO:0008234
Ahy17g2326 364 SMART Inhibitor_I29_2 49 105 IPR013201 -
Ahy17g2326 364 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 150 161 IPR000169 -
Ahy17g2326 364 SUPERFAMILY Cysteine proteinases 46 356 IPR038765 -
Ahy17g2326 364 Pfam Papain family cysteine protease 132 355 IPR000668 GO:0006508|GO:0008234
Ahy17g2326 364 Gene3D Cysteine proteinases 24 357 - -
Ahy17g2326 364 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 321 340 IPR025661 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2326 Ahy-Chr17 112203993 112205990 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2326 17 112203993 112205990 Ahy17g2326 17 112203993 112205990 ECH
Ahy17g2326 17 112203993 112205990 Ahy8g0090 8 1544481 1546399 hybridization
Ahy16g0099 16 965801 968504 Ahy17g2326 17 112203993 112205990 PCT
Ahy6g1246 6 18590157 18592852 Ahy17g2326 17 112203993 112205990 PCT
Ahy17g2326 17 112203993 112205990 Ahy16g0099 16 965801 968504 PCT
Ahy17g2326 17 112203993 112205990 Ahy6g1246 6 18590157 18592852 PCT