Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2315 ATGGCCGGAGAGAATAGCAAGAACGACGTCGCAGTGTATCCTCCCAAAACAAGACGGTTGTGGCCTTCTCTTCTCCGTTGGATTCCGACTTCAACGGAACACATCATCGCTGCCGAGAAGCGACTCCTTTCTCTCGTCAAGACTCCCTATGTTCAAGAACATGTTAATATTGGCTCTGGTCCTCCTGGCTCTAAAGTTAGATGGTTCCGTTCATCAAGCGACGAGCCACGGTTTCTTAACACTATTACGTTTGATAGTAAAGATGACTCCCCTACGCTTGTAATGGTCCATGGATATGCAGCTTCCCAGGGTTTCTTTTTTCGCAATTTCGATGCTCTTGCAAATCATTTTAGAGTCATTGCTGTTGATCAACTTGGCTGGGGTGGATCAAGCAGACCTGATTTTACATGTAGGAGCACTGAAGAAACTGAGACATGGTTCATAGATTCTTTTGAAGAATGGAGGAAAGCCAAAAATCTGAGCAATTTTATACTGCTTGGACATTCTTTTGGTGGTTATGTTGCTGCCAAATATGCACTCAAGCACCCTGAGCATGTAAAGCAATTGATTCTGGTGGGACCCGCTGGATTTACATCAGAATCAGATCCAAAGGCTGAGTTCATTATGAAGTTTCGAGCAACGTGGAAAGGAGCAGTTATGAACCATCTATGGGAATCTAATTTTACGCCTCTAAAAATTGTCAGAGGTTTAGGTCCTTGGGGTCCTAATATGGTCCGCCGATATACAGATATGAGGTTTGGTACGCGTGCACAAGGGGAAATACTGACTGAAGAGGAATCAAGATTGCTCACAGATTATATGTACCATGTATCAGCGGCCAAAGCTAGTGGGGAGCTGTGCTTAAAGTACATTTTTAAATTTGGTGCATTTCCTAGGATCCCCCTCTTTCACAGTGCCTCAGAGTGGAAAGTACCCACCACATTCATATATGGTTTTGACGACTGGATGAATTATGAAGGGGCCCAAGAAGCTCGCAAGGATATGAAGGTTCCATGTGAAATCATTAGGGTCCCCCAGGGAGGGCACTTTGTGTTCATTGACAACCCAAGTGGTTTCCATTCTGCTGTGCTTTATGCTTGTCGAAAATTTCTTAGACCTAATACAGACAATGAATCTCTTCCTGAAGGGCTAACCTCTGCATAG 1164 0.4424 MAGENSKNDVAVYPPKTRRLWPSLLRWIPTSTEHIIAAEKRLLSLVKTPYVQEHVNIGSGPPGSKVRWFRSSSDEPRFLNTITFDSKDDSPTLVMVHGYAASQGFFFRNFDALANHFRVIAVDQLGWGGSSRPDFTCRSTEETETWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVKQLILVGPAGFTSESDPKAEFIMKFRATWKGAVMNHLWESNFTPLKIVRGLGPWGPNMVRRYTDMRFGTRAQGEILTEEESRLLTDYMYHVSAAKASGELCLKYIFKFGAFPRIPLFHSASEWKVPTTFIYGFDDWMNYEGAQEARKDMKVPCEIIRVPQGGHFVFIDNPSGFHSAVLYACRKFLRPNTDNESLPEGLTSA* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2315 387 PANTHER RE40534P-RELATED 19 377 - -
Ahy17g2315 387 Pfam alpha/beta hydrolase fold 91 356 IPR000073 -
Ahy17g2315 387 PRINTS Epoxide hydrolase signature 344 366 IPR000639 GO:0003824
Ahy17g2315 387 PRINTS Epoxide hydrolase signature 179 192 IPR000639 GO:0003824
Ahy17g2315 387 PRINTS Epoxide hydrolase signature 116 131 IPR000639 GO:0003824
Ahy17g2315 387 PRINTS Epoxide hydrolase signature 311 327 IPR000639 GO:0003824
Ahy17g2315 387 Gene3D alpha/beta hydrolase 78 368 IPR029058 -
Ahy17g2315 387 SUPERFAMILY alpha/beta-Hydrolases 82 364 IPR029058 -
Ahy17g2315 387 PRINTS Alpha/beta hydrolase fold signature 116 131 IPR000073 -
Ahy17g2315 387 PRINTS Alpha/beta hydrolase fold signature 165 178 IPR000073 -
Ahy17g2315 387 PRINTS Alpha/beta hydrolase fold signature 179 192 IPR000073 -
Ahy17g2315 387 PANTHER BNAA01G13630D PROTEIN 19 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2315 Ahy-Chr17 111512347 111515632 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2315 17 111512347 111515632 Ahy17g2315 17 111512347 111515632 ECH
Ahy17g2315 17 111512347 111515632 Ahy8g0101 8 1868198 1871609 hybridization
Ahy16g0095 16 902622 906593 Ahy17g2315 17 111512347 111515632 PCT
Ahy6g1252 6 18705872 18709896 Ahy17g2315 17 111512347 111515632 PCT
Ahy17g2315 17 111512347 111515632 Ahy16g0095 16 902622 906593 PCT
Ahy17g2315 17 111512347 111515632 Ahy6g1252 6 18705872 18709896 PCT