Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g2293 ATGTCATCATCATCCGGGATCGGAAAATGCAGCAAGATCCGCCACATAGTGTGGCTCCGGCAGATGCTGCGGCGATGGCGCAACAAGGCCCACAATAAGTCGTCGTGGTCGAAGAGCCAGCGTACGCCCTCCGATGTCCCCGCAGGACACGTGGCGGTGTGCGTGGGCAGCAACTCCACGAGATTCGTGGTACGCGCCACCCACTTGAACCACCCGGTGTTCAAGAACCTTCTCTTCCACGCGGAGGAAGAGTACGGTTTCTCGAACCACGGTCCCCTCGCTATTCCATGCGACGAAGCCCTCTTCAAAGAGATCCTCCGCTTCATTTCCCGATCTGACTCATCGTCCTCCCGCTTCGTTAACCACGATGACCTCCAGAGATACTGCCACGCTGGCAGCATCCGTACCAACCTGGACTTTTTGCCCGACTCCATGCCGTTACTCACTAACAACTAA 456 0.5702 MSSSSGIGKCSKIRHIVWLRQMLRRWRNKAHNKSSWSKSQRTPSDVPAGHVAVCVGSNSTRFVVRATHLNHPVFKNLLFHAEEEYGFSNHGPLAIPCDEALFKEILRFISRSDSSSSRFVNHDDLQRYCHAGSIRTNLDFLPDSMPLLTNN* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g2293 151 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 148 IPR003676 GO:0009733
Ahy17g2293 151 PANTHER SMALL AUXIN-UP RNA-RELATED 8 148 - -
Ahy17g2293 151 Pfam Auxin responsive protein 19 108 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g2293 Ahy-Chr17 110775929 110777086 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g2293 17 110775929 110777086 Ahy17g2293 17 110775929 110777086 ECH
Ahy17g2293 17 110775929 110777086 Ahy8g0114 8 2135103 2136244 hybridization
Ahy16g0078 16 711879 713166 Ahy17g2293 17 110775929 110777086 PCT
Ahy6g1265 6 18986268 18987718 Ahy17g2293 17 110775929 110777086 PCT
Ahy17g2293 17 110775929 110777086 Ahy16g0078 16 711879 713166 PCT
Ahy17g2293 17 110775929 110777086 Ahy6g1265 6 18986268 18987718 PCT