Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy17g0510 ATGTTGTCTTCACTATGCATGAGTCCCTTCTCCAGCAAAGGAGAAGAAGCACATTCACCACCAAGCACACGAACATCACACCATGAACTATGTCTCCATGATCATGCTCTTACTGCTCCATCACTGAGCCAATCCACATCTCCTTATATAAACCTCTTAGAAAACTTGAGCATCACAAAAAGGATGACTGCACATCGCTCACGTTCTGCACCGGCCGTACTATTCACCGACACTGGCATAGACTTTCATGAGCCCTCTGAACCTAGACCTATACAAAATTCATCAACCTTAATGGTAAGGGTATCTTTCATCTCTGTATTCTTGTATTTGGCAATTGGTGTTGCAGTGTACATGATAAATGGGAGTTTCAAGGGTACCACCACACTTAAGCTTATAGATGCTATTTACTTCACAGTAGTAACTCTAAGCACAATTGGATTTGGAGATATTGTTCCTGATGCAACATCTACCAAGATCTTTACCTGTGGTTTCATTTTGGTTGGTTTTGGACTTACTGGTTTTCTCCTCAGCGGCTTGGTTGAATACATCTGTGATACTCAAGAAGCATTCACGTTGAGCATGATGGATGAGAATAGATATAAGAGAATTCTCTGGACTTACATAGTTGATGAAGAGAAAGGAAGAATGCGAATTCGGACAAAAGTTTCTTTAGCTTTGGTGGTTGTCATCGTCTGCATCGCAACAGGAGCAGTCACAGCTCACTTTCTAGAGGGTATGGATTGGATAGACAGTTTCTATCTCTCCATTACGTCTGTTACGACAGTTGGTTATGGCGATTATGCTTTCAAAACTGTAACTGGAAGATGCTTCGCGATTATCTGGCTTTTGGTAAGTACATTGGCAGTTGCTAGGGCCTTTCTGTACCTAACTGATTATAGCATGCACAAGAGGAAACGTAAGGTAGCAAAATTGGTTCTTCATAAGAAGATAACTATGTCAGATTTAGTAGCTGCAGACCTTGATAATGATGGATCAATAAGCAAGTCCGAATTTCTTATCTACAAGCTCAAGGAAATGGGAAAAATAACTGAGATTGACATTCTGCAAATAAGCAAACAATTTGATTCCTTGGGTTGTGGCATCTATGGCAAGATTAGTGTTGCTGACCTTATGGTAAATGTCTAA 1146 0.4049 MLSSLCMSPFSSKGEEAHSPPSTRTSHHELCLHDHALTAPSLSQSTSPYINLLENLSITKRMTAHRSRSAPAVLFTDTGIDFHEPSEPRPIQNSSTLMVRVSFISVFLYLAIGVAVYMINGSFKGTTTLKLIDAIYFTVVTLSTIGFGDIVPDATSTKIFTCGFILVGFGLTGFLLSGLVEYICDTQEAFTLSMMDENRYKRILWTYIVDEEKGRMRIRTKVSLALVVVIVCIATGAVTAHFLEGMDWIDSFYLSITSVTTVGYGDYAFKTVTGRCFAIIWLLVSTLAVARAFLYLTDYSMHKRKRKVAKLVLHKKITMSDLVAADLDNDGSISKSEFLIYKLKEMGKITEIDILQISKQFDSLGCGIYGKISVADLMVNV* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy17g0510 381 MobiDBLite consensus disorder prediction 1 19 - -
Ahy17g0510 381 SUPERFAMILY Voltage-gated potassium channels 195 317 - -
Ahy17g0510 381 Pfam Ion channel 105 183 IPR013099 -
Ahy17g0510 381 Pfam Ion channel 228 299 IPR013099 -
Ahy17g0510 381 PANTHER OS01G0696100 PROTEIN 46 376 - -
Ahy17g0510 381 ProSitePatterns EF-hand calcium-binding domain. 326 338 IPR018247 -
Ahy17g0510 381 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 46 376 IPR003280 GO:0005267|GO:0016020|GO:0071805
Ahy17g0510 381 SUPERFAMILY Voltage-gated potassium channels 95 183 - -
Ahy17g0510 381 MobiDBLite consensus disorder prediction 1 27 - -
Ahy17g0510 381 PRINTS Two pore domain K+ channel signature 260 269 IPR003280 GO:0005267|GO:0016020|GO:0071805
Ahy17g0510 381 PRINTS Two pore domain K+ channel signature 140 168 IPR003280 GO:0005267|GO:0016020|GO:0071805
Ahy17g0510 381 Gene3D - 208 322 - -
Ahy17g0510 381 Gene3D - 88 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy17g0510 Ahy-Chr17 4918613 4920470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy17g0510 65 378 Ion Channels AT4G18160 50.629 7.82e-103 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy17g0510 K05389 - gmx:100789639 488.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy17g0510 17 4918613 4920470 Ahy17g0510 17 4918613 4920470 ECH