Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3677 ATGGATTCAGCTCTTGCAATCTTGAATAACACGAGTAGCATTAATCTAGTTAGCAAAGGAGTTGGAAGAAAAACGAGTTCTAGTTTCTGGGGTGAAAGTGCAAAAAAGGAGAGTTTGAATAGCAGGTTTTTCATTACTCAACCATGCAACATGAATTTGATGAACAAAAGAAAGTTGAAGCATGGCATTGCACATGCTGTATACACACCAGATATGAATTCCATGGTATACCCTAAAGTTATTTTTCAGAATCCAAAACCAAATCCAGAAAATGTAGCTGCCATAATTTTGGGTGGTGGTGCTGGAACTCGACTCTTTCCTCTAACTAGCACAAGAGCCAAACCCGCTGTTCCAATTGGAGGATGTTACAGACTCATAGACATTCCTATGAGCAATTGCATCAATAGTGGGGTTAAAAAAATATATGTTCTAACACAGTACAACTCTTTCTCCCTCAATGGCCATCTCTCTCGCACTTATAATTGTGGAAATGGAGTGTTCACTGGAACTGACTTTGTGGAGGTCTTGGCTGCTACTCAAACTCCTGGAGAAGCAGGAAAGGAATGGTTCCAAGGAACAGCTGATGCTGTGAGAAGATTTATATGGGTTTTTGAGGATGCCAAACACAAGAACATTGAGAATGTGTTAATACTTTCTGGTGATCATCTTTGCCGGATGGACTACATGAAATTTTTGGAGAGACATACTGAATCAAATGCTGATGTCACAATTGCTTGTGTACCAATGGATGAAAGTCGTGCATCAGATTATGAGCTGGTAAAAATTGATAGAATGGGACGGGTTAGGCAGTTTGCAGAAAAACCAAAAGGATCAGATTTGAAGGAAATGCAAGTTGATCCCAACATTCTAGGATTACCTGCAAAAGAAGCAAAGGAAAATCTTTACATGGCATCCATGGGAGTTTATGTATTTAGAACTGAAATTCTGCTGAAACTACTAAGATTGAGTTGTCCTTCTTGTAATGACTTGGGATCTGAAATCATCCCAACAGCAGTGAGGGATCACAAAGTCCAATCATATTTGTTTAGAGACTATTGGGAAGATATTGGAACTATAAAGTCCTTCTATGATGCAAATATGGCCTTAACAGAACAGCCTCCAAAATTTGAATTCTATGATCCAAAGACGCCTTTCTACACTTCCCCAAGATTCTTACCTCCCACTAAAGTACTAAAATCTAAGATCGTGGACGCAATTATTTCGCATGGTTGCTTTTTGAGTGAGTGTAACATTCAACGTTCAGTCATTGGCGTCCGCTCGTGTTTGGCGTCTGGTTCAGTTCTTGAGGATACAATGATGATGGGAGCAGACTACTATGAAACTGATTCTGAAATTGAATCTCTTGTAGCACGAGGAAAGGTCCCAATTGGTGTTGGAGAGAATACCAAAATCAGGAATTGCATAATCGACAAGAATGCCAGGATAGGAAGAGATGTGATTATTGCAAATTGTGATGGTGTACAAGAAGCAGACAAGCCAGAAGAAGGATTTTACATTAGGTCAGGCATCATAGTTGTAGTGAAGAATGCAACAATTAAGGATGGAACAGTTATCTAA 1578 0.3942 MDSALAILNNTSSINLVSKGVGRKTSSSFWGESAKKESLNSRFFITQPCNMNLMNKRKLKHGIAHAVYTPDMNSMVYPKVIFQNPKPNPENVAAIILGGGAGTRLFPLTSTRAKPAVPIGGCYRLIDIPMSNCINSGVKKIYVLTQYNSFSLNGHLSRTYNCGNGVFTGTDFVEVLAATQTPGEAGKEWFQGTADAVRRFIWVFEDAKHKNIENVLILSGDHLCRMDYMKFLERHTESNADVTIACVPMDESRASDYELVKIDRMGRVRQFAEKPKGSDLKEMQVDPNILGLPAKEAKENLYMASMGVYVFRTEILLKLLRLSCPSCNDLGSEIIPTAVRDHKVQSYLFRDYWEDIGTIKSFYDANMALTEQPPKFEFYDPKTPFYTSPRFLPPTKVLKSKIVDAIISHGCFLSECNIQRSVIGVRSCLASGSVLEDTMMMGADYYETDSEIESLVARGKVPIGVGENTKIRNCIIDKNARIGRDVIIANCDGVQEADKPEEGFYIRSGIIVVVKNATIKDGTVI* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3677 525 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 1 525 IPR011831 GO:0005978|GO:0008878
Ahy16g3677 525 Gene3D Hexapeptide repeat proteins 391 525 - -
Ahy16g3677 525 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 80 390 IPR029044 -
Ahy16g3677 525 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 3, CHLOROPLASTIC 1 525 - -
Ahy16g3677 525 CDD ADP_Glucose_PP 94 356 - -
Ahy16g3677 525 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 92 489 IPR011831 GO:0005978|GO:0008878
Ahy16g3677 525 CDD LbH_G1P_AT_C 393 519 - -
Ahy16g3677 525 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 304 314 IPR005836 GO:0005978|GO:0008878
Ahy16g3677 525 SUPERFAMILY Nucleotide-diphospho-sugar transferases 91 486 IPR029044 -
Ahy16g3677 525 Pfam Nucleotidyl transferase 94 371 IPR005835 GO:0009058|GO:0016779
Ahy16g3677 525 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 189 197 IPR005836 GO:0005978|GO:0008878
Ahy16g3677 525 SUPERFAMILY Trimeric LpxA-like enzymes 387 525 IPR011004 -
Ahy16g3677 525 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 98 117 IPR005836 GO:0005978|GO:0008878
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3677 Ahy-Chr16 154694057 154699328 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3677 16 154694057 154699328 Ahy16g3677 16 154694057 154699328 ECH
Ahy16g3677 16 154694057 154699328 Ahy6g2924 6 115390052 115395323 hybridization
Ahy16g3677 16 154694057 154699328 Ahy17g2375 17 114330965 114336140 PCT
Ahy16g3677 16 154694057 154699328 Ahy8g0051 8 807804 812731 PCT
Ahy17g2375 17 114330965 114336140 Ahy16g3677 16 154694057 154699328 PCT
Ahy8g0051 8 807804 812731 Ahy16g3677 16 154694057 154699328 PCT