Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3602 ATGGCAGCTTCACTATCATCCCTCACTTCCTCCTTCTCTTCACTCTCCTTCTCTTCTCACGTTTCCCAAAGATCCCACGCGCTCACGCTCCCTCCCTCGCGCGTCTCTAAATCAACTACATTCCCCTCCCTCGCTGTCTCTGCCTCTTCCGCCGCCGCTGCCGTTTCTCCGGCGGAGCCAGAAACTGTTGACCTCAGGCGCCTCGTCAAGTCCAGGCTTCCCGGTGGATTCGCCGCTCAAACCATCATTGGTACCGGTCGCCGGAAGTCTGCCATAGCTCGTGTTGTTCTTCAAGAAGGAACCGGGAAATTCATCATCAATTACCGTGATGCTAAGGAATATCTTCAGGGAAACCCATTGTGGCTTCAATACATTAGGGTCCCCTTAATAACTCTTGGATATGAAAATAGTTACGATGTTTTCGTCAAAGCCGAGGGTGGTGGCCTCTCTGGTCAAGCGCAAGCAATTTCCCTCGGTATTGCCCGCGCCCTGCTGAAGGTGAGTGAAGATCACAGACAACCTTTGAGACAAGAAGGGCTTCTGACTAGAGATTCTAGAGTGGTTGAAAGGAAGAAACCTGGTCTGAAGAAAGCTCGTAAAGCACCTCAGTATTCCAAACGTTGA 624 0.5128 MAASLSSLTSSFSSLSFSSHVSQRSHALTLPPSRVSKSTTFPSLAVSASSAAAAVSPAEPETVDLRRLVKSRLPGGFAAQTIIGTGRRKSAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYIRVPLITLGYENSYDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRQPLRQEGLLTRDSRVVERKKPGLKKARKAPQYSKR* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3602 207 ProSitePatterns Ribosomal protein S9 signature. 146 164 IPR020574 GO:0003735|GO:0005840|GO:0006412
Ahy16g3602 207 SUPERFAMILY Ribosomal protein S5 domain 2-like 81 207 IPR020568 -
Ahy16g3602 207 PANTHER RIBOSOMAL PROTEIN S9 64 207 IPR000754 GO:0003735|GO:0005840|GO:0006412
Ahy16g3602 207 MobiDBLite consensus disorder prediction 176 207 - -
Ahy16g3602 207 MobiDBLite consensus disorder prediction 176 191 - -
Ahy16g3602 207 Hamap 30S ribosomal protein S9 [rpsI]. 77 207 IPR023035 -
Ahy16g3602 207 MobiDBLite consensus disorder prediction 192 207 - -
Ahy16g3602 207 Gene3D - 73 207 IPR014721 -
Ahy16g3602 207 PANTHER 28S RIBOSOMAL PROTEIN S9, MITOCHONDRIAL 64 207 - -
Ahy16g3602 207 Pfam Ribosomal protein S9/S16 86 207 IPR000754 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3602 Ahy-Chr16 153696768 153699253 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3602 16 153696768 153699253 Ahy16g3602 16 153696768 153699253 ECH
Ahy16g3602 16 153696768 153699253 Ahy6g2847 6 114392763 114395248 hybridization