Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3574 ATGGCCCTGACGGAGTTAATTAGCAACGAGCTCACCGGCGAGCTCCTCCGGAATCTCGTAACCATCTCTCGCAAATCCATTCTCTGCCGTGGAAGTGCAGATCAGCTCATAACTTACATAACTGAACTCCTTCCAACCATACAAGAGATCAAATACTCCGGCGTTGAACTCCCTCAGCCACGTCAGCAACAGCTTCACCGCCTCTCCGAGATCCTCCACTCTGGTGTCGAACTCGCTCACAAGGTTCTGAATTCGAGCCGTTGGAATGTGTACAAGAACTTTCAGCTAGCTAAAAAGATGGAGAAGCTTGAGAACACGGTATCAAAGTTCATAGAGGGTCCGATGCAGACTCACATACTTGCTGATGTGCACCACACGCGGTTCGAGATGGCGGAGCGGTTCGACCGGATCGAGGCGTCGAACCGGAGGCTGGAGCAGTACTTTGTGACCATGAAGATGGGGGGGATGGGAGGTGGAGGGTGGGTCGAGGAGGCTGTGAGGAGCATGGAGATTGCTGAGGGTAGTTTAGGGAATTCACGTGTGGGTTTGGAGCTTGGGAAGAAGAAAGTCAAGGAGATGCTTGTTGGGAGGAATGATCTTTGGGTGATTGGGATTTCTGGTATTGGTGGCTCAGGGAAGACCACTCTTGCTAGAGATGTTTGCAGAGATGAACAAGTTCAATTTTCTTTCAAGGAGAGAATCTTGTTTTTGACTGTGTCACAGTCCCCAAATGTTGAGCAGCTAAGAGCAAGGATCTGGGGGTTCATTATGGGGAATCAAAACTTGAATCCAAATTATGTGATTCCCCAATGGATGCCGCAATTCGATTGCAAAACCGAAACTCGAAACCTTATTGTTCTTGATGATGTCTGGTCACTCTCTGTGCTGCAACAGCTTGTATGCAGAATACCTGGCTGCAAGTTCCTTGTTGTCTCCAGAGAGAAATTCCAAATTTGTAATGCCACTTATGAGGTGGAACTGTTGAGTGAAGAGGATGCACTATCTTTGTTCTGTCATCATGCTTTTGGACAGAAATCAATCCCTGTAGCTGCTAATGAGAATCTAGTAATGCAGGTTGTGACAGAGTGTGGAAGGCTTCCACTAGCTCTTAAAGTGATTGGAGCTTCCTTGAGAGATCAGAATGAAATGTTTTGGGAAGGTGTCAAAACAAGGCTATCTCAGGGCCAAAGCATTGGGGAATCTTACCAAAACAATCTGATTGAGAGAATGGCAATCAGTGTAAACTTCCTGCCAGAGAAGATCAAGAAATGCTTCTTGGACCTTTGTTCATTTCCTGAGGACAAGAAAATCCCTCTGGACATCCTCATCAATATGTGGGTCGAAATGCATGATATCTGCCAAACCGAAGCCTTTACTATGGTCGTTGAGCTTTCAAACAAGAATCTTCTCACCTTGGTGAAAGAGGCGCGTGCTGGAGACATGTATAGCAGTTGCTTTGAGATATCTGTTACTCAACATGATATACTCAGAGACCTTGCGCTCAATATGAGCAACTGTGACAGCATTTGTGAACGCCGGCGATTGGTTATGCCAAAGCGAGAAGCAAGTGGTCTCCCTAAAGAGTGGTTGAGATACAAGGATAAACCATTTGAGGCTCAGATTGTCTCAATTCACACGGGTGAAATGAAAGAAAAGGATTGGTGCAACCTTGAGTTTCCCAAGGCTGAAGTTCTGATTATTAATTTTTCATCCAGTGAATACTTCCTGCCTCCCTTCATTCAATCAATGCCAAATCTGAAGACATTGATTATAATAAACTATAGTGCTTCTTATGCATGCCTTCACAATATGTCAATTTTTGAGAAGTTGACAAACTTGAAGAGTCTCTGGCTTGAAAAGGTTTCCACTCCAGAGTTATCAGGCATTGTGATGAAAAATCTAAGCAAATTATGTCTAGTCCTTTGCAAGATCAATAACAGTTTGGAGGGGAAAGAACTCAAAGAAGCAGACCTATCTAGAATCTTCCCAAACCTCACCGAACTCACTCTTGATCACTGTGATGATGTAACTGATCTTCCCTCAAGCATCTGTGAAATACATTCCCTGCAGAACTTGAGTCTAACAAATTGTCACAATCTGACGAAACTACCTGCCGAATTGGGGCAACTGCGATCGCTTGAGATCCTCCGGCTATATGCATGTCCGGATTTGAAGTCCCTTCCTCTGAGCATATGTAATATGATTAAGTTGAAGTACATAGACATTTCTCAATGTGTTAACCTGGCATGCTTCCCTAATGAGATTGGTAAGTTGGTCAATTTGGAGAAGATTGACATGAGGGAATGCTCCATGATTAGGAGCATACCAAAGTCTGCATTGTCATTGAAGAATCTAAGGCTTGTGATTTGTGATGAGGAGGTACAAGATATGTGGATAGATGTTCAAAAGGCCAAGCCAAAAGAATTTCATATTCAAGTATCTGAACAGCAATATGATCTGGATTGGCTAAAAGATTGA 2478 0.4399 MALTELISNELTGELLRNLVTISRKSILCRGSADQLITYITELLPTIQEIKYSGVELPQPRQQQLHRLSEILHSGVELAHKVLNSSRWNVYKNFQLAKKMEKLENTVSKFIEGPMQTHILADVHHTRFEMAERFDRIEASNRRLEQYFVTMKMGGMGGGGWVEEAVRSMEIAEGSLGNSRVGLELGKKKVKEMLVGRNDLWVIGISGIGGSGKTTLARDVCRDEQVQFSFKERILFLTVSQSPNVEQLRARIWGFIMGNQNLNPNYVIPQWMPQFDCKTETRNLIVLDDVWSLSVLQQLVCRIPGCKFLVVSREKFQICNATYEVELLSEEDALSLFCHHAFGQKSIPVAANENLVMQVVTECGRLPLALKVIGASLRDQNEMFWEGVKTRLSQGQSIGESYQNNLIERMAISVNFLPEKIKKCFLDLCSFPEDKKIPLDILINMWVEMHDICQTEAFTMVVELSNKNLLTLVKEARAGDMYSSCFEISVTQHDILRDLALNMSNCDSICERRRLVMPKREASGLPKEWLRYKDKPFEAQIVSIHTGEMKEKDWCNLEFPKAEVLIINFSSSEYFLPPFIQSMPNLKTLIIINYSASYACLHNMSIFEKLTNLKSLWLEKVSTPELSGIVMKNLSKLCLVLCKINNSLEGKELKEADLSRIFPNLTELTLDHCDDVTDLPSSICEIHSLQNLSLTNCHNLTKLPAELGQLRSLEILRLYACPDLKSLPLSICNMIKLKYIDISQCVNLACFPNEIGKLVNLEKIDMRECSMIRSIPKSALSLKNLRLVICDEEVQDMWIDVQKAKPKEFHIQVSEQQYDLDWLKD* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3574 825 Pfam NB-ARC domain 187 415 IPR002182 GO:0043531
Ahy16g3574 825 Gene3D - 327 406 IPR042197 -
Ahy16g3574 825 Gene3D - 175 325 IPR027417 -
Ahy16g3574 825 PRINTS Disease resistance protein signature 732 748 - -
Ahy16g3574 825 PRINTS Disease resistance protein signature 202 217 - -
Ahy16g3574 825 PRINTS Disease resistance protein signature 363 377 - -
Ahy16g3574 825 PRINTS Disease resistance protein signature 277 291 - -
Ahy16g3574 825 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 822 IPR044974 GO:0006952
Ahy16g3574 825 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 13 133 IPR008808 -
Ahy16g3574 825 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Ahy16g3574 825 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 428 IPR027417 -
Ahy16g3574 825 SUPERFAMILY L domain-like 564 788 - -
Ahy16g3574 825 Gene3D Ribonuclease Inhibitor 548 807 IPR032675 -
Ahy16g3574 825 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 3 822 - -
Ahy16g3574 825 Gene3D - 408 499 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3574 Ahy-Chr16 153372695 153376605 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3574 598 793 Receptor kinase-like Gene Family AT3G05660 26.633 2.11e-08 56.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3574 16 153372695 153376605 Ahy16g3574 16 153372695 153376605 ECH
Ahy16g3574 16 153372695 153376605 Ahy6g2821 6 114068690 114072600 hybridization