Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3573 ATGGCTCTGAACGACTTCTTCGCCGGCGAGATCGCGACGGAGCTCATGAAGATGCTGATAAGCATATCACGCAAGTCACTCCTCTGCAGAACAAGCGCTGATCAGCTCAGAACTTACATCAACGAACTACTCCCTACCATTCAAGAGATCAAGTACTCCGGCGTCGAGCTTCCCGCCGATAGGCAGCGCCAGCTCGACCGCTTTTCCGAGATTCTTCGCTCCGGCGTCGAGCTCTCACATAAGGTTCTTAATTCGAACCGGTGGAACGTGTACAAGAACTTGCAGCTAGCGAAGAAGATGGAGAAGCTTGAGAAGACCGTGTCACGGTTTGTGCAAGGTCCAATGCAAGCTCACATATTGGCTGATGTGCACCACGCCCGGGTCGAGATGGCCGAGAGGTTCGACCGGGTCGATGCGTCGAACCAGAGGCTAGAGCAGTACTTTAGTGCCATGAAGATAGGAGTGGGAGGAGGAGGGTGGATAGAGGAGGCTGTGAGCAGCATGGAGGTGGATGAGAGTGGGGTGGAGGGTAATTTGGGGAATTTAGGTGTAGGTTTGGAACTTGGAAAGAAGAAGGTTAAGGAAATGGTAATTGGAAGGAATGATATTTGGGTTGTTGGGATTTGTGGGATTGGTGGCTCGGGGAAGACTACACTTGCTAGAGAAGTATGCAAAGATGAACAAGTCAGAAGTCATTTCAAGGAAAGAATCTTGTTCCTAACAGTCTCACAATCTCCAAATGTTGAGCAACTAAGAGCAAAGATATGGGGTTTCATTATGGGAAACCAAGGCTTCATAAGTTCAAATTATGTTGTTCCTCAAAGAATGCCACAAACTGAATGCAGGAGTGAAGTTCAAAGATTGATTGTTCTTGATGATGTTTGGTCCCTCTCTGTGTTAGAATATCTTGTGTGCAGAGTACATGGTTGCAAGTTCATTGTGGTTTCGAGAGAGAGATTTCCAACAATTTTCAATGCTACTTATGAAGTGGAATTGCTGAGTAAAGAGGAAGCATTAGCTTTGTTCTGTCACCATGCTTTTGGTCAAAAATCAATTCCTTTGGATGCTGATAGCAATTTGGTCAACCAGGTTGTGACCGAATGTGGAAGGCTTCCGTTGGCTCTTAAAGTGATCGGAGCTTCATTGCGCGATCAGACCGAGATGTTCTGGGCTAGTGTCAAGAACAGGCTATCTCAAGGACAAAGCATTGGTGAATCCTATGAAATCAACCTCATTGATAGAATGGCAATCAGCACAAATCACTTACCAGAAATGATCAAAGAATGCTTTTTAGATCTTTGTTCATTCCCAGAGGATAAGAAGATTCCACTAGATGTTCTCACTAATATGTGGGTTGAAATCCATGATATTGATCAGAAAGAAGCTTTTGCAATTGTTGTGGAGCTCTCAAACAAGAATCTTCTCACATTAGTGAAAGAAGCTCGTGCTGGTGGCATGTATAGCAGCTGCTTTGAGATATCTGTTACTCAGCATGATATACTGAGAGACCTTGCTCTTAATTTGAGCAATCGCAGCAGCATCCGTGAACGCCGCCGATTAGTTATGCCTAAACGAGAAGATCACGGCCGACTGCCTAAACAATGGTTGAGATATAAGGACAGGCCATTTGAGGCTCAGATCGTTTCAGTTCACACAGGTGAAATGAAAGAAGAAGATTGGTGTCACCTTGAGTTTCCTAATGCCGAAGTTTTGATAATCAATTTCACATCCAATGAATACTACTTACCTCCCTTCATTGCAAAAATGCCAAATTTGAGGTCATTAATTATCATAAACTATAGTGCATCATATGCTTCCCTTCACAATGTATCAGTTTTTCAGAATTTGACCAATCTTAGAAGCCTTTGGCTTGAAAAAGTTTCAACCCCTCAATTATCAGGCACTATAATGAAAAGCTTAGGGAAATTATTCATAGTCCTATGCAAATTAAATAATAGTTTAGAGGGTAAAGAAGCAAACCTAGCACAAGCATTTCCTAACCTAAGTGAACTCACTCTTGATCATTGTGATGATGTTACTGAATTACCCTCAAGCATTTGTGAGATACATTCACTTCAAAACTTGAGTCTCACAAACTGTCACAATTTGACCAAATTGCCCTCAGAACTAGGCAAGCTAAGATCACTTGGGATACTAAGACTGTATGCTTGTCCAGAACTGAAATCACTTCCTAGTAGCATATGTGACATGATTAAGTTGAAGTATATAGACATATCTCAATGTGTTAACCTTGCAATGTTCCCTAATGAGATTGGAAAATTGGTGAATTTAGAGAAGATTGACATGAGGGAATGCCCTATGATTAAGAGTTTACCAAAATCAACAGTGTCATTGAAGAATCTGAGGCTTGTGATATGTGATGAGGAGGTACAAGAGGTTTGGAATGAGGTTGAGAAGGCAAAGCCAAATCTCCACATTAAAGTCTCAGAGCAATACTATGATTTGGATTGGCTTAAAGAGTGA 2484 0.4227 MALNDFFAGEIATELMKMLISISRKSLLCRTSADQLRTYINELLPTIQEIKYSGVELPADRQRQLDRFSEILRSGVELSHKVLNSNRWNVYKNLQLAKKMEKLEKTVSRFVQGPMQAHILADVHHARVEMAERFDRVDASNQRLEQYFSAMKIGVGGGGWIEEAVSSMEVDESGVEGNLGNLGVGLELGKKKVKEMVIGRNDIWVVGICGIGGSGKTTLAREVCKDEQVRSHFKERILFLTVSQSPNVEQLRAKIWGFIMGNQGFISSNYVVPQRMPQTECRSEVQRLIVLDDVWSLSVLEYLVCRVHGCKFIVVSRERFPTIFNATYEVELLSKEEALALFCHHAFGQKSIPLDADSNLVNQVVTECGRLPLALKVIGASLRDQTEMFWASVKNRLSQGQSIGESYEINLIDRMAISTNHLPEMIKECFLDLCSFPEDKKIPLDVLTNMWVEIHDIDQKEAFAIVVELSNKNLLTLVKEARAGGMYSSCFEISVTQHDILRDLALNLSNRSSIRERRRLVMPKREDHGRLPKQWLRYKDRPFEAQIVSVHTGEMKEEDWCHLEFPNAEVLIINFTSNEYYLPPFIAKMPNLRSLIIINYSASYASLHNVSVFQNLTNLRSLWLEKVSTPQLSGTIMKSLGKLFIVLCKLNNSLEGKEANLAQAFPNLSELTLDHCDDVTELPSSICEIHSLQNLSLTNCHNLTKLPSELGKLRSLGILRLYACPELKSLPSSICDMIKLKYIDISQCVNLAMFPNEIGKLVNLEKIDMRECPMIKSLPKSTVSLKNLRLVICDEEVQEVWNEVEKAKPNLHIKVSEQYYDLDWLKE* 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3573 827 Gene3D - 413 504 IPR036388 -
Ahy16g3573 827 Pfam NB-ARC domain 191 413 IPR002182 GO:0043531
Ahy16g3573 827 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 3 824 - -
Ahy16g3573 827 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 824 IPR044974 GO:0006952
Ahy16g3573 827 PRINTS Disease resistance protein signature 687 703 - -
Ahy16g3573 827 PRINTS Disease resistance protein signature 368 382 - -
Ahy16g3573 827 PRINTS Disease resistance protein signature 281 295 - -
Ahy16g3573 827 PRINTS Disease resistance protein signature 205 220 - -
Ahy16g3573 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 433 IPR027417 -
Ahy16g3573 827 Gene3D - 180 322 IPR027417 -
Ahy16g3573 827 Gene3D Ribonuclease Inhibitor 546 811 IPR032675 -
Ahy16g3573 827 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Ahy16g3573 827 Gene3D - 332 411 IPR042197 -
Ahy16g3573 827 SUPERFAMILY L domain-like 567 791 - -
Ahy16g3573 827 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 133 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3573 Ahy-Chr16 153363516 153367851 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3573 16 153363516 153367851 Ahy6g2820 6 114059511 114063846 hybridization