Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3571 ATGCCTCCAATAATTTCACGCAAACCATCATCACCACCATCATGTGTTGTGCATGATCATCATGATGAAAAAACCATGAAGAAACAAAGCAACTACCAGAGATCAAAAACATGTAACAGTATCAACACCAACGTTCTTGATGAGGTTCAGCATGTTACAAGGCAGAGGAAGTTGGTTAGGCACCTTAAGGACAAAGAAGTCTTTGATTTGTTGCATTTGCACTCCACTATCAATTGTTCTTGTTCTTCTTCCTGCTCGCGAGGCCGTAGTTCTAGCATCGGCTGCGGACACTGGTCTATTTCTGCTAAGCCGCAGCCGTTGCCACTTCCCGAGTCAACGGGCCTCGGATTAGGCCATGTCCACCTGCTTGGATCTCCTTCCACAGAACAGCCTAGTTTTGCTTTGACTTTGAGGAAAACAGTGAATCATGGTGCATTGACATGTACAAAACCTTCAAGCAATTTGGATAGACCCTCTCAAGACCTTACAACTATAGCAAAAGCAAAAAATAATCTGAGAGTGCACATTCCAGCTAAAACTTTCTTGGCAGGGAATAGTTCATGCAAAATTCCCCCATCATTGTGTCATTATGATGAAAATGATGATGATGATTGTGTGAGTATTTCTGGTTTGAGCATGCATGTTGCTGCCAAGAGTGCCCCATCAAGTGTCTTCTCTAGTCCAGTCACTAGTCCACATGGATCAAACAACAACCCACAACATTTCTTTGATCATCATCACACCATCAATAATATCCTTCAACAACTCAATGACAATGATTTCAATTTGTATCATCATCATCACCACCACCTACCACAAGCTAATACTAACAAAAATAATGTTCATATTTGCCCTGCTAGCTTAAGTACTGCTTATCATTCTAATCCCAAAAATAACCATGTTGATGCACATCCCTTGCCACTTCCTCCTAGAGTTTCATCATCAATGATACTACATCAACCATCACCTTCTTCAATGAAAGGCCAATGGCAGAAAGGGAAACTAATCGGTCGCGGCACCTTTGGAAGTGTTTATCATGCAACCAACCTAGAAACTGGAGCTTCTTGTGCAATGAAGCAAGTGGATATAATTCCTGATGATCCTACATCTGCTGAGTGCATAAAGCAACTAGAGCAGGAAATCAAAATCCTTCATCAACTACACCACCCCAATATAGTGCAGTATTATGGAAGTGAAATAGTTGGTGATCATTTGTACATATATATGGAGTATGTTCATCCAGGATCAGTTAATAAATTTATTAGGGAGCATTGTGGAGCTATGACAGAATCTGTAGTTCGAAATTTCACAAGACACATTCTCTCTGGATTGGCCTACTTACACAGCACCAAGACTATTCACAGGGATATCAAAGGTGCAAACTTGCTTGTTAATGAATCTGGCATTGTCAAGCTTGCAGATTTTGGGATGGCCAAAATTCTCTCAGGGAATTCATATGAACTTTCTTTGAAGGGAAGTCCTTATTGGATGGCTCCTGAGGTGATGAAAGCTGCCATTAAGAATGAATCAAATCCTGATGTTGCCATGGGTATTGATATATGGAGCTTAGGCTGCACCATCATTGAAATGTTGTCAGGAAAGCCTCCTTGGAGTGACCTTGAAGGGCCATCAGCAATGTTCAAGGTACTACAGAGCACACCACCAATACCAGAGAGTTTATCATCAGTGGGAAAGGATTTCCTGCAGCAATGTTTCAGAAGGGACCCTGCTGATAGACCTTCTGCATCAATGCTTCTTAACCATCCCTTTCTCCACAACTTTCATGATCAAGATAATCCTCTAATTCATCCTCATTTAAATTTGTGTCACAAAGGAGACCAAGGACAAGGAGATAATTCATCTAGTCCCAAAGATAATACCAAAAATAGACATGATATATTGCCAACCTCCATGAGCACAAAGATTTTCAACAAAACTCAGAAATTAATGGGTGCTGAGGAATCTAAACACATTATTATAGCTTCCCATCACAATCTTCAATCTTCAGTTAAAGCTGGCACCTTCAATTACTCGTCTCTTGCAAAGTCCAGCAACCTATCATCCCTGCCTCACTCAAATTTGAAGCATGTCATGAGCTAA 2100 0.4086 MPPIISRKPSSPPSCVVHDHHDEKTMKKQSNYQRSKTCNSINTNVLDEVQHVTRQRKLVRHLKDKEVFDLLHLHSTINCSCSSSCSRGRSSSIGCGHWSISAKPQPLPLPESTGLGLGHVHLLGSPSTEQPSFALTLRKTVNHGALTCTKPSSNLDRPSQDLTTIAKAKNNLRVHIPAKTFLAGNSSCKIPPSLCHYDENDDDDCVSISGLSMHVAAKSAPSSVFSSPVTSPHGSNNNPQHFFDHHHTINNILQQLNDNDFNLYHHHHHHLPQANTNKNNVHICPASLSTAYHSNPKNNHVDAHPLPLPPRVSSSMILHQPSPSSMKGQWQKGKLIGRGTFGSVYHATNLETGASCAMKQVDIIPDDPTSAECIKQLEQEIKILHQLHHPNIVQYYGSEIVGDHLYIYMEYVHPGSVNKFIREHCGAMTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVNESGIVKLADFGMAKILSGNSYELSLKGSPYWMAPEVMKAAIKNESNPDVAMGIDIWSLGCTIIEMLSGKPPWSDLEGPSAMFKVLQSTPPIPESLSSVGKDFLQQCFRRDPADRPSASMLLNHPFLHNFHDQDNPLIHPHLNLCHKGDQGQGDNSSSPKDNTKNRHDILPTSMSTKIFNKTQKLMGAEESKHIIIASHHNLQSSVKAGTFNYSSLAKSSNLSSLPHSNLKHVMS* 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3571 699 ProSiteProfiles Protein kinase domain profile. 330 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3571 699 Pfam Protein kinase domain 331 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy16g3571 699 MobiDBLite consensus disorder prediction 609 632 - -
Ahy16g3571 699 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 25 691 - -
Ahy16g3571 699 Gene3D Transferase(Phosphotransferase) domain 1 327 629 - -
Ahy16g3571 699 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 25 691 - -
Ahy16g3571 699 SUPERFAMILY Protein kinase-like (PK-like) 313 609 IPR011009 -
Ahy16g3571 699 ProSitePatterns Protein kinases ATP-binding region signature. 336 359 IPR017441 GO:0005524
Ahy16g3571 699 SMART serkin_6 330 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3571 Ahy-Chr16 153345236 153351518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3571 294 593 MAP Kinase Kinase Kinase AT5G66850 66.774 1.48e-149 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Ahy16g3571 Pkinase 1.30E-67 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3571 16 153345236 153351518 Ahy6g2818 6 114041231 114047513 hybridization
Ahy16g3571 16 153345236 153351518 Ahy17g2480 17 118522893 118527541 PCT
Ahy16g3571 16 153345236 153351518 Ahy8g0282 8 5823337 5827329 PCT
Ahy17g2480 17 118522893 118527541 Ahy16g3571 16 153345236 153351518 PCT
Ahy8g0282 8 5823337 5827329 Ahy16g3571 16 153345236 153351518 PCT