Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3560 ATGACAAGTATTATATCATCCATGGAGAGATCAAAATCATCCATTGATCAAATTCAGCCCCCAACTTATGGAAACTTAATTACCATCCTCAGCATTGATGGAGGTGGTATTAGGGGACTTATCCCAGCAACCATTCTTAATTTCCTTGAATCACAACTTCAGGAGTTGGATGGTGAAGATGTGAGGCTTGCAGATTATTTTGATGTGATATCAGGAACAAGCACTGGAGGTCTTGTAACTGCTATGTTAACTGCTCCAGATAAACATAACCGTCCACTTTTTGCCGCTAAGGATATCAAACCCTTTTACATGGAACACTGCCCAAATATTTTTCCACAACCTAGAGGACTCCGTGGAACATTAATGGCAAAGGTAATAAGACAATTAGGAGGACCAAAATATGATGGAAAATATTTGCATGGAGTGGTTAAAGAGAAACTTGGAAACATTCGTTTGCATGAGACCATCACCAATGTTGTTATTCCCACCTTTGACATCAAAACTTTGCAACCAACTATTTTCTCATCTTACCAGATTAAGAATTCGCCTTGTTTGGATGCAAAATTATCAGACATATGCATTGGCACATCAGCTGCACCAACCTATCTCCCTGCTCACCAATTCACCAACAAAGTTCCAAAAGGAAATGTGCATGAATTCAACCTCATTGATGGTGGTGTTTGTGCCAATAATCCGACTCTAGTTGCTATGAATCAAGTAACAAAGCAAATAATCAACCAGAATGCTGATTTCTTTCCAATAAAGCCTTCAGACTATAGTCGGTTCCTAATAATTTCAATAGGGACTGGGACAGCCAAAAATGAAGAAAAAATGGATGCAAAAATGACAGCTAAATGGGGTTTATTAGATTGGCTAACTCATAGTGGCTCCATTCCTTTAATTGATATTTTTTCTCAATCAAGTTCTGATATGGTTGATTTCCATTTAGCTACTCTCACTCGAGCACTTCATTCAGAACACAATTATCTTCGAATTCAGGATGACACGTTGATTGGAAATGATTCTTCAGTTGACATTGCTACTAAGGAGAATTTGGATAGACTTTGCCAAATTGGTGAAAATTTGTTGAAGAAACCAGTTTCTAGGATGAATTTAGAGAATGGTAAAATTGAACCAATTGGAAATGGAGGAACCAATGAAGAAGCACTCAAAAGGTTCGCAAAAATACTTTCACACGAGAGGAGACTCCGTGACATGAGATCCCCTCACACTAAGAAAGCATCTACTACTAAATAG 1257 0.3803 MTSIISSMERSKSSIDQIQPPTYGNLITILSIDGGGIRGLIPATILNFLESQLQELDGEDVRLADYFDVISGTSTGGLVTAMLTAPDKHNRPLFAAKDIKPFYMEHCPNIFPQPRGLRGTLMAKVIRQLGGPKYDGKYLHGVVKEKLGNIRLHETITNVVIPTFDIKTLQPTIFSSYQIKNSPCLDAKLSDICIGTSAAPTYLPAHQFTNKVPKGNVHEFNLIDGGVCANNPTLVAMNQVTKQIINQNADFFPIKPSDYSRFLIISIGTGTAKNEEKMDAKMTAKWGLLDWLTHSGSIPLIDIFSQSSSDMVDFHLATLTRALHSEHNYLRIQDDTLIGNDSSVDIATKENLDRLCQIGENLLKKPVSRMNLENGKIEPIGNGGTNEEALKRFAKILSHERRLRDMRSPHTKKASTTK* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3560 418 SUPERFAMILY FabD/lysophospholipase-like 26 373 IPR016035 -
Ahy16g3560 418 CDD Pat17_isozyme_like 24 375 - -
Ahy16g3560 418 PANTHER XYLOSE ISOMERASE 8 413 - -
Ahy16g3560 418 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 30 237 IPR002641 GO:0006629
Ahy16g3560 418 Gene3D Cytosolic phospholipase A2 catalytic domain 16 409 - -
Ahy16g3560 418 PANTHER PATATIN 8 413 - -
Ahy16g3560 418 Pfam Patatin-like phospholipase 30 237 IPR002641 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3560 Ahy-Chr16 153223302 153227964 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3560 18 412 Miscellaneous Gene Families AT2G26560 65.063 0.0 531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3560 16 153223302 153227964 Ahy16g3560 16 153223302 153227964 ECH
Ahy16g3560 16 153223302 153227964 Ahy6g2807 6 113919297 113923959 hybridization