Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3546 ATGCAAGCTGTGGAGAGGCTAGGGAGCTTCATCACCCGCGGAGTCTCGACTGTTTCAATGCCGTTCATCCCTTATGGTGGTGCTGTGGACATTGTTGTAGTTCAACAAAAAGATGGCAGCTTCAAGTCCTCTCCTTGGTTCGTTCGATTCGGGAAACTTCACAGGGTTCTCAAGGCTGATGAGAAGAAGGTTAGCATCAGTGTCAATGGATCCGAAGCCGGTTTCCACATGCACATGAACCATAAAGGGGAAGCCTTCTTTTTGAGGGATACACATTGTGAACAACAAGGGGATGAAGATTCTGGATCTAGCGAATCATCCTCGTCCGGCGAAGATGCTGATGTTGTCCTACCATGGGGCAGGAAGAGGAATTTCAAGTCAAAAAGTTGCAAGTTTGATCCGGATGGATCATTTGTAGCTGATATGAATGCCTTAAACAATGATAAGATTGTGGACAGGACTAATTCTCGCGGATCCCGGCTATTTAGGCTTGTGTTGGGGCAAAGGTCCTTCAATGGGGAAGTTGATGAAGATGCAGAAGACTTATTGGAACGTGCTGAGATTGCAGCCAACCTTTTGGACCTCAAGTGGTCTACAAATCTGAAATTCGACCAGCTACCTCGTCGAGAAAGAAAGAACACTAGGGGTGGTACCTTGGAGAATGGTTTACATTCATCTAAGGTTGATGATTTGCATGCTCAGCAAAGGGATTGTTCTCATAGTGTCCTTGATATGTTTGATGTTGCGGACTTTGAAAAGCTACCTAAATTTCAAAAATCTCGCACCATTAGTGTATATCGGCCACATCGAAAAGCCAACAAGGTTAGGGCAGATACCCCAACATCTGAACAGCTAGCATCCTTGAATCTCCAGGAAGGAAGGAACTTGGTAACCTTTCGTTATTCGACAGCTATGTTGGGGACACAGAAGATTGATGCTCGGATATATTTGTGGAAATGGAACACCCGAATAGTGATATCGGACGTGGATGGAACAATTACAAGGTCTGATGTTCTAGGTCAGGTCATGCCTTTAGTCGGAATCGATTGGTCACAAACCGGTGTTGCACATTTATTCTCTGCTATCCAGGATAATGGATACCAACTACTTTTTCTTAGTGCTCGTGCAATTTCTCAAGCCTGTCACACCAGACGATTCCTATTCAACCTTAAACAGGATGGGAAAGTATTACCGGATGGTCCGGTCGTCATTTCCCCGGACGGACTTTTTCCTGCTCTGTATCGAGAAGTTATCCGGAGAGCTCCTCATGAATTCAAAATCGCATGCTTAGAGGAAATAAGGGCACTTTTCCCTCCTGATTGCAATCCATTCTATGCTGGTTTCGGAAATAGGGATACTGATGAACTCAGCTACCTTAAGGTTGGAATCCCTAAAGGAAAAATCTTCATAATCAATCCCAGGGGAGAGATTGCTGTAAATTGTTTCGACGCGCAATCATATCCTTCTCTTCATGCCGTTGTAGATGGAATATTCCCCCCGACAGACTCGTCTGAGCAGGAGGATTTCAATTCATGGAACTGTTTGCGGTTGCCCTCGGTGTCATAA 1566 0.4502 MQAVERLGSFITRGVSTVSMPFIPYGGAVDIVVVQQKDGSFKSSPWFVRFGKLHRVLKADEKKVSISVNGSEAGFHMHMNHKGEAFFLRDTHCEQQGDEDSGSSESSSSGEDADVVLPWGRKRNFKSKSCKFDPDGSFVADMNALNNDKIVDRTNSRGSRLFRLVLGQRSFNGEVDEDAEDLLERAEIAANLLDLKWSTNLKFDQLPRRERKNTRGGTLENGLHSSKVDDLHAQQRDCSHSVLDMFDVADFEKLPKFQKSRTISVYRPHRKANKVRADTPTSEQLASLNLQEGRNLVTFRYSTAMLGTQKIDARIYLWKWNTRIVISDVDGTITRSDVLGQVMPLVGIDWSQTGVAHLFSAIQDNGYQLLFLSARAISQACHTRRFLFNLKQDGKVLPDGPVVISPDGLFPALYREVIRRAPHEFKIACLEEIRALFPPDCNPFYAGFGNRDTDELSYLKVGIPKGKIFIINPRGEIAVNCFDAQSYPSLHAVVDGIFPPTDSSEQEDFNSWNCLRLPSVS* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3546 521 PANTHER GH19076P 1 212 - -
Ahy16g3546 521 PANTHER LIPIN 264 519 IPR026058 -
Ahy16g3546 521 Pfam LNS2 (Lipin/Ned1/Smp2) 279 499 IPR013209 -
Ahy16g3546 521 PANTHER LIPIN 1 212 IPR026058 -
Ahy16g3546 521 SMART lns2 324 480 IPR031315 -
Ahy16g3546 521 MobiDBLite consensus disorder prediction 94 113 - -
Ahy16g3546 521 Pfam lipin, N-terminal conserved region 1 96 IPR007651 -
Ahy16g3546 521 SUPERFAMILY HAD-like 316 467 IPR036412 -
Ahy16g3546 521 PANTHER GH19076P 264 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3546 Ahy-Chr16 153052449 153057041 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3546 16 153052449 153057041 Ahy16g3546 16 153052449 153057041 ECH
Ahy16g3546 16 153052449 153057041 Ahy6g2793 6 113748444 113753036 hybridization
Ahy16g3546 16 153052449 153057041 Ahy17g2510 17 119546363 119552960 PCT
Ahy16g3546 16 153052449 153057041 Ahy8g0300 8 6268985 6275601 PCT
Ahy17g2510 17 119546363 119552960 Ahy16g3546 16 153052449 153057041 PCT
Ahy8g0300 8 6268985 6275601 Ahy16g3546 16 153052449 153057041 PCT