Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3545 ATGATGGAGGTTTCATCAAGTTTTCAAAAAGTGTTGAAAACATCACCTTCTAGAAAAAAAGCATTGGTGATTAGAATCAACTTGCTCTGTCTTGCAATGTTTCTCATAGTTTATGCAACACTTCTATTTCGTCCATCTTCTTCTATCTATTTTGAGAATGCAGCATCACTTGTCAAATGCTCCTTACGTGAATGCCATCACAAGGCAGAAAAAAGCATAAAAATGAAAGCAGTGATGGAAGAGCCTCAAGTGAAAGCACCAAAGATGCCAAAGAAGAATGCAATGAAGATAGAGAAGCCTAGTTTCTTTGATCAAATTATGGGTAAAGGAGTGAAGAACATTGGTATGGTGAACTTTGATGAAGAAGAAGATGATGTTAGTGAATGGAACATGCAAGGTGAAAAAACAATCATCCCAATTCACTTTGAGAAGGTATCCTCCCAATTCAATTGGACAGATTTGTTCCCTGAATGGATCGACGAAGAAGAAGAGAGCGATGTTCCATCTTGTCCAGATATTCCCATGCCGGATTTCAATGTGCATCAAAACATGGACATAATTGTGGCGAAGTTGCCATGCAACAATAATAAAGAAGGGTGGGGTAGGAATGTTTATAGGCTACAAGTTCATCTAATTGTGGCAAATTTGGCTGCGAAGAATAAGGGTAAGAGGGATTATGGGAGATTGAAGACTAAGGTTGTTTTTTTAAGCAAGTGTAGGCCAATGTTGGAAATTTTTAGGTGCAATGATTTGGTTAAGAATGATGGTGATTGGTGGTACTATGAGCCTGATTTGAAGAGATTGGAGCAAAAGGTTTCATTGCCTGTTGGATCATGCAAGTTGGCTTTGCCTCTTTGGGAACAAGGGATTGACAAAGTGTATGACACGTCGAAGATTCAAAAAATGGTTACAAAGAATGCAAAAACAAAACGTGAGGCGTACGCTACAGTGCTTCACTCCTCCGACGACTATGTGTGTGGCGCAATAATGCTGGCACAAAGCCTCCTCAGAACGGGAACCAAGCGTGACCTAATCCTCCTTCTTGACAACTCCATCTCTGCTGCCAAGCGTCGTGCACTCTCCGCATCTGGGTGGAAGATCCGAATCATAACTCGGATTAGAAACCCAAAGGCGGAGAAACACTCCTACAACGAGTACAACTACAGTAAATTTCGGTTGTGGCAGTTAACAGACTATGACAAGGTTATTTTTATTGATGCTGACATTGTTGTTTTGAGGAACCTTGATGTTCTGTTTCATTTTCCACAAATGTCGGCCACTGGGAATGATCAGAGTATATTTAATTCTGGGATTATGGTGATTGAGCCTTCAAATTGCACATTTAATGTGCTGATGGAGAGTAGATATGATATTGTTTCATATAATGGTGGTGACCAAGGCTTCCTTAACGAGATTTTTGTCTGGTGGCACAGGTTACCAAGGAGGGTGAACTACTTGAAGAATTTTTGGGCCAACACAACATTAGAAGCAAGCAAGAAGAACCATCTATTTGGGGCAGAGCCACCAAAGCTATACTCAATACACTACCTTGGATTAAAGCCATGGTATTGTTATAGGGACTATGATTGCAATTGGGACGTTGAGGACCAAAGGGTGTATGCTAGTGACGTGGCACATCATAAGTGGTGGCAGCTGCATGACCAAATGGACAAAAAGCTTCAACGCATGTGTAGGCTCACAAAACGACGTCGTACAAACCTCAATTGGGAGAGAAGAAAAGCTTCCAAATTAGGTTTGCCTGATCAACATTGGAAGATTAATATTACGGATCCCAGAAGATCTGGTTCACTTTTGATGAATTAA 1824 0.4079 MMEVSSSFQKVLKTSPSRKKALVIRINLLCLAMFLIVYATLLFRPSSSIYFENAASLVKCSLRECHHKAEKSIKMKAVMEEPQVKAPKMPKKNAMKIEKPSFFDQIMGKGVKNIGMVNFDEEEDDVSEWNMQGEKTIIPIHFEKVSSQFNWTDLFPEWIDEEEESDVPSCPDIPMPDFNVHQNMDIIVAKLPCNNNKEGWGRNVYRLQVHLIVANLAAKNKGKRDYGRLKTKVVFLSKCRPMLEIFRCNDLVKNDGDWWYYEPDLKRLEQKVSLPVGSCKLALPLWEQGIDKVYDTSKIQKMVTKNAKTKREAYATVLHSSDDYVCGAIMLAQSLLRTGTKRDLILLLDNSISAAKRRALSASGWKIRIITRIRNPKAEKHSYNEYNYSKFRLWQLTDYDKVIFIDADIVVLRNLDVLFHFPQMSATGNDQSIFNSGIMVIEPSNCTFNVLMESRYDIVSYNGGDQGFLNEIFVWWHRLPRRVNYLKNFWANTTLEASKKNHLFGAEPPKLYSIHYLGLKPWYCYRDYDCNWDVEDQRVYASDVAHHKWWQLHDQMDKKLQRMCRLTKRRRTNLNWERRKASKLGLPDQHWKINITDPRRSGSLLMN* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3545 607 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 310 561 IPR029044 -
Ahy16g3545 607 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 2 9 601 IPR030519 GO:0005794|GO:0009834|GO:0015020|GO:0045492
Ahy16g3545 607 SUPERFAMILY Nucleotide-diphospho-sugar transferases 314 562 IPR029044 -
Ahy16g3545 607 Pfam Glycosyl transferase family 8 317 522 IPR002495 GO:0016757
Ahy16g3545 607 PANTHER GLYCOGENIN SUBFAMILY MEMBER 9 601 - -
Ahy16g3545 607 CDD GT8_Glycogenin 312 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3545 Ahy-Chr16 153011462 153017215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3545 75 607 Glycosyltransferase AT4G33330 65.549 0.0 720
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3545 16 153011462 153017215 Ahy16g3545 16 153011462 153017215 ECH
Ahy16g3545 16 153011462 153017215 Ahy6g2792 6 113707457 113713210 hybridization
Ahy16g3545 16 153011462 153017215 Ahy17g2512 17 119586191 119590908 PCT
Ahy16g3545 16 153011462 153017215 Ahy8g0302 8 6289655 6293655 PCT
Ahy17g2512 17 119586191 119590908 Ahy16g3545 16 153011462 153017215 PCT
Ahy8g0302 8 6289655 6293655 Ahy16g3545 16 153011462 153017215 PCT