Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3544 ATGGAGGGTGTTGAGGAGAATCTACCCTCATCAGAATCCTCTTCAGAAAGTGCTAATGAGCAAAAGCAGCAAAATGTAGAAACCCCTGGTGAAACTTCACATGTAAATGAATCCACTGTTAGTGATAGTAGAGAAGAATCCGAGACTCGTTTGCCGGAGACAACAGCCGAGGAATTAACCGAATCAGCAATGCTGCCTAATGCTTCTTCTGGTAGTCCAATTATTGTTGAAGAAATTGAAAATCCTCCCACAGATGACTCGGCATCATCGCCGCTGGATGATACTAAGCTTCACACAGCAGGATCAAATGATGATCAAATTATAGAACAAGATAATTCAGGTTCTACAGAGAATGTAGATTCTGAAGAGATCCTTGAGCAGCAGAAGAATGTTGAGACTGATGATTCAAATGATGTCCAAATCACAGAACAAGATGATTCAGCTTCTACAGCGAATGCAGATTCTGAAGAGATCCTTGAGAAGCAGGAGATTGTTAATAATGATGATCGAATCATGGAACAAGAAAATTCAGCTTCTATGGAGAATGCAGATTCTGAAGAGATCCTTGAGAAGCAGGAGGATGTTAATAATGATGATCAAATCATAGAACAAGATAGTTCTGCTTCTACAGCAAATGCAGATTCTGAAGAGAGCCTTGAGAAGCAGGAGAATTTTCATAATGATGATTCAAATGATCATCAAACGTTAGAACAAGATAATTCAGCTTCTACGGCGAATGCAGATTCTGAGGAGATCCTTGAGAGGCAAAAGAATGTTAATGATGAAGACTCAAAAGATAATCAAATCATAGAACAAGATAATTCAGCCTCTGCAGAAAATGCAGATTCTGAAGAGATCCTTGAGAAGCAGGAGAATGTTACTAATGATGATCCAAATGATGATCAAATCATAGAACAAGATAATTCAGCTTCTACGGCGATTGCAGATTCTGAAGAGATTCTTGAGAAGCAGGAGAATGTTAACGATGAAGATTCAAAAGATGATCAAATCATAGAACAAAATTCAGCTTCTACAGAAAATACAGGTTCTGAAGAGATCCTTGAGCAGCAGAATAATGTTAATGATGAAGATTCAAAAGATGATCAAATCATAGAACAAAATTCAGCTTCTACAGACAACACAGGTTCTGAAGAAATCCTTGAGCCGCAGAAGAATGTTAATGATGAAGACTCAAAAGATGATCAAATCATAGAACAAAATTCAGCTTCTACAGAAAATGCAGGTTCTGAAGAAATCCTTGAGCCGCAGAAGAATGTTAATGATGAAGACTCAAAAGATGATCAAATCATAGAGCAAGATAATTCAGCTTCTACAGAAAATCCAGGATCTGAAGAGATCCTTGAGCAGCAGAAGAATGTTAATACCGATAATTCAAATGATGGTCAAATCTTAGAACAAGAGAATTCAGCTTCTACAGAAAAAGCAAATTCTGAAGAAATTCTTGAGAGGCAGAAGAATATTAACAATGATGAATCTAGTGTCACTACCATCGATGATCAAACGGAGATTCCGGCTTCTAATCCTGAAACAAAAGAGTTCCATGATGACAGTACCAAAGAAGTTATGTTATCATTGCCTCAAATCATAGTTACTGATTTTAGCAAGGAAAATTCAACACTGACGAGTTCAAATTCTTGTAATGCTATGGATGCCATGAATGCTGATTCTGAACCGGAAGATTTCTATGATAGTAATCAAGGTGGTTCTGCCGTTAAAACTTCTTCCATTACGGATGCAAATGACTTGATAAAACGGTCTACATCGGCACCGGAAATAAAATTGTTGCAGATGCTGAAGGAGAATAGAAGACGAAAGATGAACTCAACGGCTCGAAAAAGGGCTGATGTTGCTCATATACCAACCGGCTCGCCTTCAAGTTCAAAGAAAAATGCTGAGAATAGAGGCTTCATCGACACGGCAGCTCCCTTCGAATCTGTAAAGGAAGCTGTTTCCAAGTTCGGAGGAATTGTGGATTGGAAGGCTCATAAGAAACAGACCGTGGAGAGACGAAAGGACGTAGAACAAGAACTCGAGAAAGTGCAGCAGGAGATCCCAATATACAAAAAGAAATCAGAGACGGCAGAGAAAGCGAAACAAGAAGTACTTCAGGAGCTGGACACCACCAAGAGACTAATAGAAGAGCTGAAACTGAACCTGGAGAGAGCACAAACCGAAGAGCGTCAGGCAAGACAGGATTCGGAACTCGCGAAGCTTAGAGTGGAAGAGATGGAGCAAGGTATCGCCGAGGACTCTAGCGTGGCGGCCAAGGCACAGCTTGAGGTCGCAAAGGCCAGGTACACTGCGGCAGTTACAGAGCTAACATCGGTTAAAGAGGAGCTGGACGCGTTGCGTAAGGAATACGCTTCCTTAGTTGTTGAAAAAGAGGAAGCTATTCAGAAATCGGAAGAAGCAATTACTTCGTCCAAACAGGTTGAGAAGACTGTGGAAGAATTAACCATTGAGTTGCTTGCTATAAAGGAATCGATGGAAGCAGCACATGCAGCGCACATGGAAGCCGAAGAACATCGGATGGAATCGGTTATGGCTAGGGATCAGGACTCTCTCAATTGGGAAAAAGATCTTAAACACTCAGAGGAAGAACTTCAAAGAATAAACCAGAAAATCTTAGCTGCTAAAGATCTTAAGTCTAAATTGGACACGGCTTCGACTTTGCTGACGGATCTGAAAGATGAAATGAATGCTTATACAGAAGCACAGTCGAGGCAAGACGGAAGTGCCGAACGTGAAGAACTGTGGCCTTTGAGGACGAAGATACACAATGAAATAAAAGAAGCCGTTGAATCTGCGAAGAAGGAACTTGCGGAAGTGAAAAGTAACATAGAAAAAGCAACTGCTGAGGTTAGTAACTTAAAGGAAGCCGCAGCGGCGTCGAAAACCGAACTTGAAGAAGAGAAATTGAACCTTGCATCGATTCGGCAAAAAGAGGAAATGGCCTCAATCACTGCGAAATCTCTAGAAGCTGAAGTAGAGAAAAGCAGAACAGAAAAGCTTCTGCTTCAGATGAAAGAAAGGGAAGCTAGAATTCCGCAGAAAGTACGAGAAGCTGCTGAAGAGGCTAAAGAAGCCAACTCACTGAGTCAAGCAGCTCGCGAAGAGCTGCAGCGAGCGAAGGAGGAGGCTGAGCAAGCGAAGGCGGCAGCGAGCGCAATGCAGAGCAGATTACTTGAAGTTCTAAAGGAGATTGAGGCTGCCAAGACTTCCGAGAGATGCGCAATGGCGGCAATCAATGCATTGAAGGAGAGTGAATTAGCTCAAAGCAGCCAAGAAGCAGATTCGTCGGCGGAGGTAGTGACGCTTTCTTTGGAGGAGTATTACTTGCTGAGCAAGCATGCACATGAGGCTGAAGAGGGAGCCAAGGCAGTGATGGCGACGGCGAATGCTGAAATTGAGGCAGCTAAGGAATCTGAAATGATAAGTTTGGAAAAGTTGAATGAAGTGACTACAGAGATTGCTGCTAGAAGAGAAACTTTAAGGGATGCAATGTGTAAAGCTGAGAAGGCTAAAGAAGGAAAGTTAGGCATGGAATACGAGTTGCGAAGATGGAGGTCGGAGCGCGACAGAGGGGAACACCAGAAAAGCATGTCCAGGGACAGTTTTGATTCAGGTTCAAGGGGTTATGACAGTGCAATTGGATCACCAGATTTAAGAAATGGAAAGAAGAAGAAGAAGTCATTTTTTCCAAGGTTTTTGATGTTCTTTGCAAGAAGAAAATCATATTCGTCACATCACTGTAGTCCCTATTGA 3786 0.4189 MEGVEENLPSSESSSESANEQKQQNVETPGETSHVNESTVSDSREESETRLPETTAEELTESAMLPNASSGSPIIVEEIENPPTDDSASSPLDDTKLHTAGSNDDQIIEQDNSGSTENVDSEEILEQQKNVETDDSNDVQITEQDDSASTANADSEEILEKQEIVNNDDRIMEQENSASMENADSEEILEKQEDVNNDDQIIEQDSSASTANADSEESLEKQENFHNDDSNDHQTLEQDNSASTANADSEEILERQKNVNDEDSKDNQIIEQDNSASAENADSEEILEKQENVTNDDPNDDQIIEQDNSASTAIADSEEILEKQENVNDEDSKDDQIIEQNSASTENTGSEEILEQQNNVNDEDSKDDQIIEQNSASTDNTGSEEILEPQKNVNDEDSKDDQIIEQNSASTENAGSEEILEPQKNVNDEDSKDDQIIEQDNSASTENPGSEEILEQQKNVNTDNSNDGQILEQENSASTEKANSEEILERQKNINNDESSVTTIDDQTEIPASNPETKEFHDDSTKEVMLSLPQIIVTDFSKENSTLTSSNSCNAMDAMNADSEPEDFYDSNQGGSAVKTSSITDANDLIKRSTSAPEIKLLQMLKENRRRKMNSTARKRADVAHIPTGSPSSSKKNAENRGFIDTAAPFESVKEAVSKFGGIVDWKAHKKQTVERRKDVEQELEKVQQEIPIYKKKSETAEKAKQEVLQELDTTKRLIEELKLNLERAQTEERQARQDSELAKLRVEEMEQGIAEDSSVAAKAQLEVAKARYTAAVTELTSVKEELDALRKEYASLVVEKEEAIQKSEEAITSSKQVEKTVEELTIELLAIKESMEAAHAAHMEAEEHRMESVMARDQDSLNWEKDLKHSEEELQRINQKILAAKDLKSKLDTASTLLTDLKDEMNAYTEAQSRQDGSAEREELWPLRTKIHNEIKEAVESAKKELAEVKSNIEKATAEVSNLKEAAAASKTELEEEKLNLASIRQKEEMASITAKSLEAEVEKSRTEKLLLQMKEREARIPQKVREAAEEAKEANSLSQAAREELQRAKEEAEQAKAAASAMQSRLLEVLKEIEAAKTSERCAMAAINALKESELAQSSQEADSSAEVVTLSLEEYYLLSKHAHEAEEGAKAVMATANAEIEAAKESEMISLEKLNEVTTEIAARRETLRDAMCKAEKAKEGKLGMEYELRRWRSERDRGEHQKSMSRDSFDSGSRGYDSAIGSPDLRNGKKKKKSFFPRFLMFFARRKSYSSHHCSPY* 1262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 282 296 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 440 482 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 7 37 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 1023 1060 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 38 55 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 250 269 - -
Ahy16g3544 1261 Coils Coil 861 912 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 83 121 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 371 388 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 1 525 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 1194 1211 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 404 420 - -
Ahy16g3544 1261 Coils Coil 933 988 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 422 439 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 389 403 - -
Ahy16g3544 1261 Coils Coil 773 807 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 216 235 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 566 580 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 184 198 - -
Ahy16g3544 1261 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 616 1200 - -
Ahy16g3544 1261 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 1224 1253 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 134 155 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 544 558 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 610 641 - -
Ahy16g3544 1261 Pfam Weak chloroplast movement under blue light 641 1200 IPR008545 -
Ahy16g3544 1261 Coils Coil 1026 1067 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 318 337 - -
Ahy16g3544 1261 SUPERFAMILY Tropomyosin 675 840 - -
Ahy16g3544 1261 PANTHER WEB FAMILY PROTEIN-RELATED 616 1200 - -
Ahy16g3544 1261 PANTHER WEB FAMILY PROTEIN-RELATED 1224 1253 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 156 170 - -
Ahy16g3544 1261 Coils Coil 670 748 - -
Ahy16g3544 1261 Coils Coil 996 1016 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 338 356 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 544 580 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 494 514 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 201 215 - -
Ahy16g3544 1261 MobiDBLite consensus disorder prediction 1194 1234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3544 Ahy-Chr16 152986678 152991848 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3544 16 152986678 152991848 Ahy16g3544 16 152986678 152991848 ECH
Ahy16g3544 16 152986678 152991848 Ahy6g2791 6 113682673 113687843 hybridization
Ahy16g3544 16 152986678 152991848 Ahy17g2513 17 119593497 119598203 PCT
Ahy16g3544 16 152986678 152991848 Ahy8g0303 8 6297385 6301942 PCT
Ahy17g2513 17 119593497 119598203 Ahy16g3544 16 152986678 152991848 PCT
Ahy8g0303 8 6297385 6301942 Ahy16g3544 16 152986678 152991848 PCT