Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3540 ATGGCTTCTGAATCGGTAACCCTTAAATCCGATGCCCTCATGGATCAGATGAAGCAGCATCTCTCCACCGACGCCGGTAAAGAAATCGTCAAGAAAATCGGACTCGTTTATCAGATTCAGATTGCCCCTAAGAAAATTGGATACAACGAGGTTATCTACACTGTTGATCTCAAGAAAGGAGAGGTCACCAAAGGGCCATACGAGGGAGGAAAGCCTGATGCAACATTTTCATTTAAGGATGAGGACTTTGTTAAGGTCGCTTTAGGGAAGATGAATCCACAACTTGCATTCATGAGGGGTGCGATGAAGATTAAGGGAAGTTTGAGCGCTGCGCAGAAATTCACTCCGGATATCTTCCCCAAGCCTGCCAAGATGTGA 378 0.4577 MASESVTLKSDALMDQMKQHLSTDAGKEIVKKIGLVYQIQIAPKKIGYNEVIYTVDLKKGEVTKGPYEGGKPDATFSFKDEDFVKVALGKMNPQLAFMRGAMKIKGSLSAAQKFTPDIFPKPAKM* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3540 125 Pfam SCP-2 sterol transfer family 15 115 IPR003033 -
Ahy16g3540 125 PANTHER SCP2 STEROL-BINDING DOMAIN-CONTAINING PROTEIN-RELATED 5 125 - -
Ahy16g3540 125 PANTHER STEROL CARRIER PROTEIN 2 SCP-2 FAMILY PROTEIN 5 125 IPR039543 -
Ahy16g3540 125 SUPERFAMILY SCP-like 5 124 IPR036527 -
Ahy16g3540 125 Gene3D - 2 120 IPR036527 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3540 Ahy-Chr16 152944553 152946684 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3540 16 152944553 152946684 Ahy16g3540 16 152944553 152946684 ECH
Ahy16g3540 16 152944553 152946684 Ahy6g2787 6 113640548 113642679 hybridization