Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3530 ATGAGAACAGTTGAAGACGGTGGCGGCATAGAGGACGAGGAGATGGTGGTTCCGACGGCGGAAAGCGGAAGCAGAGACTCCAATGCTTCTTCATCGGAGGAATGTCCGTTCCGGTTGCTGCGAGACGCGAAGGCTTCTGCAGAGAGCATCGTGTCGGAGATGCTGTCTTTTAAAAGAGATGGAAAACCTAAATCGCTCCTCAGAGAACTCATTTCTCAGATGCTCCTCCAATTCCTCAATCTCCGTCAGATAAATCGTTCTATACTGGTTGAGGAAGAACGTGTTAGAAGCGAAACTGAGAGTGCAAAGGTGCCTTTGGAGTCTACAACCCTGCAGCTTCACAATCTGATGTATGAGAAGAGTTATTATGTCAAAGCAATAAAGGCTTGCAAAGAATTAACAACAAAATATCCTGATATTGAATTGGTGTCCGAGGAAGAGTTTTTTCGTGATGCGCCTGAAGAAGTCAAGGGCTGTGTTCTGTCAAATCACAGTGCTCATGATCTGATGCTTAAAAGGCTCAATTTTGAGCTATCCCAGCGCAAAAAGCTCTGTAAACTTCATGAAAAACTAGAACAAAAGAAGAAAACCCTTTCGGAGACAATTGCAAAGCGAAAGAAGTTTTTGTCAACTCTCCCTTCAAATTTCAAGCCTCTTAAGAAAGCTTCCTTACCAGTACAAAATCAACTAGGCTTGGAGCATACTAAGAAAATAAAGCGGCATCATTCTGCGGAATTGCTTCCACAACCTCTTTATGTAATTTTCTCACAGTTGTCAGCTCAAAAGGAAGCATTTGGAGAAGCTATTGATCTGGAGATTATAGGAAACGTGAAAGATGCTCAAGCTTTAGCACATCATCAAGCTCTTAAGGACAATGGTATTTCCACATGTTCCGAATTGGAAGATGATGAACATGATGAAGATGCTCAGAGACCGGGCAAAAGGCCGAGGAGGGTTCAAGACAGAGAGAGTCTTGACCAGGCAGGAATATTTGAAGTTCATCCACTTCAAATTGTTCTCCATGTTTATGACAATGAGGTTTCTGAACTGAAGTCTGCAAAACTCATTACTCTGAAATTCGAATACATATTGCAGTTGAATATTATATGTGTTGGAACGGAAGAATCCAACAATGGTCCAGAGAATGACATTTTATGCAATTTATTCCCTGACGACACTGGTTGCGAGCTTCCTCACCAGTCAGCCAAACTCGTTGTTGGGGATTCCATAATGTTCATTCGTGATAGAACTTCCCGCCCTTACAAATGGGCTCAACACCTTGCCGGAATCAATTTCTTGCCAGAGGTGTCTCCTCTGCTGCTGATGAGCCGTGAAACTCAAGAGAACAGTGATGCAGCCAAGGATGAAGATGTTATATCTGGCTTTTTGCCAAACCGCCAACACATCCGAGTACATACAATTCTGCAGAGAATTCGTTCAAAGAGAAAAACTCAGTTGGCTCTCTCCTGA 1470 0.4306 MRTVEDGGGIEDEEMVVPTAESGSRDSNASSSEECPFRLLRDAKASAESIVSEMLSFKRDGKPKSLLRELISQMLLQFLNLRQINRSILVEEERVRSETESAKVPLESTTLQLHNLMYEKSYYVKAIKACKELTTKYPDIELVSEEEFFRDAPEEVKGCVLSNHSAHDLMLKRLNFELSQRKKLCKLHEKLEQKKKTLSETIAKRKKFLSTLPSNFKPLKKASLPVQNQLGLEHTKKIKRHHSAELLPQPLYVIFSQLSAQKEAFGEAIDLEIIGNVKDAQALAHHQALKDNGISTCSELEDDEHDEDAQRPGKRPRRVQDRESLDQAGIFEVHPLQIVLHVYDNEVSELKSAKLITLKFEYILQLNIICVGTEESNNGPENDILCNLFPDDTGCELPHQSAKLVVGDSIMFIRDRTSRPYKWAQHLAGINFLPEVSPLLLMSRETQENSDAAKDEDVISGFLPNRQHIRVHTILQRIRSKRKTQLALS* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3530 489 PANTHER FMS INTERACTING PROTEIN 23 489 IPR019163 -
Ahy16g3530 489 Coils Coil 181 201 - -
Ahy16g3530 489 MobiDBLite consensus disorder prediction 307 322 - -
Ahy16g3530 489 MobiDBLite consensus disorder prediction 299 322 - -
Ahy16g3530 489 MobiDBLite consensus disorder prediction 1 34 - -
Ahy16g3530 489 Pfam Fms-interacting protein/Thoc5 80 432 IPR019163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3530 Ahy-Chr16 152847634 152851056 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3530 16 152847634 152851056 Ahy16g3530 16 152847634 152851056 ECH
Ahy16g3530 16 152847634 152851056 Ahy6g2777 6 113543629 113547051 hybridization
Ahy16g3530 16 152847634 152851056 Ahy17g2521 17 119809717 119815638 PCT
Ahy16g3530 16 152847634 152851056 Ahy8g0313 8 6484174 6490125 PCT
Ahy17g2521 17 119809717 119815638 Ahy16g3530 16 152847634 152851056 PCT
Ahy8g0313 8 6484174 6490125 Ahy16g3530 16 152847634 152851056 PCT