Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3529 ATGGTTACGGAAGGACCCGCCATCGAAGCTCTCGGTTCTCTCTTCAAAATCACACAAGTCTTTCTATGGGATGATGGTTCTCCGGGTTCTCTCCCACTAGAAGGCTCTAAATCGGCTGAAGTTCATGGCAATGGCAATGACAATGACAATGAAAATGACAGCTCGAACCTTGTTCCTGATTGGAGCGATCTTCTCGAACCTGAGGATTTGGAACTTAACAAACAGATGAGTGAATTGGGTCTCCCTCTTTCCTTTCACACAACCAAAGAGAAAAGTGGACCAGGGAAAGGTAAAAAAAAGGGCTCACGTTCAAAGCTTCGGCGTACTTGTCATACTGCAGAGGAGGTTGTATCTGCTGCTGAATTTCATGATAAGGCAAGCAGTTCTGTATCTTGTGTATCAATGCTGGGCCAAAGTGAATCATCTTACTGCAGTGTAATGGAGATTGATATGACTCGATGTGCCTCTGTTGAAGGAGATAATTCAGCATGCTGCACTGCAGAGAAACATGATGAAGATATAATTGAGGCAGCAACTAATGAAACCCCGGATAGTGACTCTCTAATCAACAATGCATGTGTTGATTTAAAAATTCCACCAGCTTTGGCCACCGGAGTCTCTGCTGGAAGCCACTTGACAAGTCCCAGCGCCAGTTATTGTGGGATAAAACACGATGAAAGCTTAATTGGCGTTGAATGTTTAGAAATTTCACCAATTGTTAGCAAAGAGACGACCGAGAGTGAGACCATTTGCAATGATGATGATGCTGGCACTTGGCATCCACCAACTAATGAATCAGAATTGGTTACCATGAGTATAGAAGGGACTGGATGTGGCCAAATCAACATGTCAAATTATCTTGGCGAACTCGGAGATTGGATGGTGTTTTGGGATACTTTCTACATGAGAAAATACTTCTATAATACCACAACACAGACTTCTACATGGGACCCACCCCCAGGGATGGAGCATCTAGCAATTGTTGAGTCCATTGAATTAGACGATGGCAGGGCTTTAAAGGAAGCAGAGGAGTGCAAAACACAAAATAACACTAAAGCACCCCATGAAACCTTGATTGAAGAGGAGTCAGAAGGAAAGCAACATGATGAGTATTCAACTAGTATCGAAGTTGGTGGCAAGTTGGTTTCCGATCTCACTACACATAGCGAGGAGCAATTGGTGGATCATTCTGATGAGTATCTTGAGAGAAGTAGTTCCAACGGTGGAGTTTCATGCTCCTCAGTATCAAATGCTATGGAGCACACAATTAGTTCCAATGAAGGAAACATACAGGCAGCATCAGAGGTTAATTATAAACACTTAGAAAACATGGTTATTGATACACCTGAATATATCGAGTTTGATCCATCCACGTCAAAAGAGGGCAATAAAGTGAAAAGGAGACATAGGCAGAGAAGAAAATCCTATAGTGAAACTGAAGTTCAATTTCAAGAAATGCCTGAAGAGTATCCTGCTGCAATTGGCAAATATTGGTGGCAGAGATATATTTTGTTCTCTAGATTTGATGATGGTGTAAAAATGGATGAGGAAGGATGGTTTTCTGTCACTCCAGAGCCTATTGCTCGACATCAAGCAGAGCGTTGTGCTAGTGGCATTATAATTGACTGTTTTGTTGGTGTTGGTGGGAATGCTATCCAATTTGTGAAGAGTTGCAATCATGTGATAGCGATTGATATTGATCCGCTGAAGATTGATTATGCTAGGCATAATGCTGCCATTTATGGGGTGGATGATCAAATTAACTTCATAATCGGTGACTTCTTTGTCTTGGCACCTAAGTTAAAGGCCGATACGGTTTTCTTGTCTCCACCTTGGGGAGGACCTGATTATTTAAAGGTTGCGACTTATGACATGAAGACAATGCTTAAACCGCATGATGGATTTACTCTGTTCAATCTTGCAAAGGAGATTGCTTCCAAAGTTGTAATGTTCCTTCCAAGAAATGTAGATTTCAATCAATTGGCAGAGTTATCTCTATCTACCAGTCCACCATGGTCACTAGAGGTGGAGAAAGTTCACTTAAATGGAAAACTGAAGGCGATCACTGCATATTTCAGCGACACAAGAGTTGGAGGTTGCTCGATGAATAAACACATTCGCTTCTGCTCAAGCTCAAGTGATGAAGAATCAGGATCCCTGCAATGA 2166 0.4201 MVTEGPAIEALGSLFKITQVFLWDDGSPGSLPLEGSKSAEVHGNGNDNDNENDSSNLVPDWSDLLEPEDLELNKQMSELGLPLSFHTTKEKSGPGKGKKKGSRSKLRRTCHTAEEVVSAAEFHDKASSSVSCVSMLGQSESSYCSVMEIDMTRCASVEGDNSACCTAEKHDEDIIEAATNETPDSDSLINNACVDLKIPPALATGVSAGSHLTSPSASYCGIKHDESLIGVECLEISPIVSKETTESETICNDDDAGTWHPPTNESELVTMSIEGTGCGQINMSNYLGELGDWMVFWDTFYMRKYFYNTTTQTSTWDPPPGMEHLAIVESIELDDGRALKEAEECKTQNNTKAPHETLIEEESEGKQHDEYSTSIEVGGKLVSDLTTHSEEQLVDHSDEYLERSSSNGGVSCSSVSNAMEHTISSNEGNIQAASEVNYKHLENMVIDTPEYIEFDPSTSKEGNKVKRRHRQRRKSYSETEVQFQEMPEEYPAAIGKYWWQRYILFSRFDDGVKMDEEGWFSVTPEPIARHQAERCASGIIIDCFVGVGGNAIQFVKSCNHVIAIDIDPLKIDYARHNAAIYGVDDQINFIIGDFFVLAPKLKADTVFLSPPWGGPDYLKVATYDMKTMLKPHDGFTLFNLAKEIASKVVMFLPRNVDFNQLAELSLSTSPPWSLEVEKVHLNGKLKAITAYFSDTRVGGCSMNKHIRFCSSSSDEESGSLQ* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3529 721 CDD AdoMet_MTases 540 620 - -
Ahy16g3529 721 Gene3D Vaccinia Virus protein VP39 488 697 IPR029063 -
Ahy16g3529 721 MobiDBLite consensus disorder prediction 32 61 - -
Ahy16g3529 721 SMART ww_5 288 321 IPR001202 GO:0005515
Ahy16g3529 721 MobiDBLite consensus disorder prediction 85 107 - -
Ahy16g3529 721 CDD WW 291 321 IPR001202 GO:0005515
Ahy16g3529 721 ProSitePatterns WW/rsp5/WWP domain signature. 293 319 IPR001202 GO:0005515
Ahy16g3529 721 MobiDBLite consensus disorder prediction 41 59 - -
Ahy16g3529 721 Gene3D - 284 338 - -
Ahy16g3529 721 PANTHER S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED 77 695 - -
Ahy16g3529 721 ProSiteProfiles WW/rsp5/WWP domain profile. 293 321 IPR001202 GO:0005515
Ahy16g3529 721 SUPERFAMILY WW domain 283 320 IPR036020 GO:0005515
Ahy16g3529 721 Pfam RNA cap guanine-N2 methyltransferase 539 693 IPR019012 GO:0001510|GO:0008168|GO:0009452
Ahy16g3529 721 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 506 629 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3529 Ahy-Chr16 152838847 152847356 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3529 16 152838847 152847356 Ahy16g3529 16 152838847 152847356 ECH
Ahy16g3529 16 152838847 152847356 Ahy6g2776 6 113534842 113543351 hybridization