Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3527 ATGTCTTGCAAGGAACTATTTGGTGGCACTTACCTCTTACTGAACCCTCAAGAGGCAACTCTTCTTGATCTTCTGAGACTCCTTTTTTCTTCTAAACTCCAAAACCGGAGTTTCATCGAATGTCCGGTGGACATTAAAGCAGAGGAATTCCGGCAAAGATGGCTCCTCTTCACCTCCATTGTCGCGCAAAAGCTTCTATTCACTTCAGGGAACACCATGAAAATGGTAGGAGGCAACTTGGAGTTGTGGCTCAATACACTTTCAAGCAATGGAGGATTTTTAGGGCTCTTCAAAAACAAACTAAAAGGAAAGGTGATAACACCAGATGCATCATCAGCAACGTTCATGTCCGTGGCAGGGTTCCTTGACTACCGAGTTGACTTAGACAAAAGCATTCAAGATAAGAACGATGATGCAAAGTACAAAGCTTTGTTATCTATGATGGCTTCAAAGTTCTCCTACGAGAATGAAGAATACGTTGGAAACGCAATTAGAAATCATTGGCATATGAAGTTTTGGGGGTTATACAGTTTCTGGAACGATTTCCAAGAACTTTGGTCAACAAAAGCCATCATATTACAAGACACTAAGACCAAACCCAACTTGATTGTGGTTGCATTTAGAGGCACCCAACCATTTAATTCTGCCCAATGGATAACAGATGTAGATCTCTCATGGTATGAGCTTCCCAATGTTGGAAAGATCCATAGTGGGTTCATGAAAGCATTGGGCCTACAAAAAAATGGTGGGTGGCCCAAAGAGATAGATCAAACAAGCAAAAGTAATCATATTTATGCTTACTATACGCTTAGGGAGGAATTGAAAACAATGTTGCATGCAAATGAGGATGCAAAGTTCATAGTGACAGGGCATAGTTTGGGAGGGGCATTGGCAATTTTGTTTGCTGCAATTCTTACTTTGCATGAGGAGGCATGGCTTTTGGACAAGTTAGAAGGGGTTTACACATTTGGGCAGCCAAGGGTAGGGGACCAAGCATTTGGGGACTTCATGAAAGAGAGTATGAGAAAATATGATGTGAAATATAGGAGGTATGTTTATTGCAATGACTTGGTGCCTAGGATCCCTTATGAAGACAAAACCCTATTCTTTAAGCACTTTGGTCCTTCCTTATACTTCAACAGCTTGTACCAAGGGCAGGTTCTAGAGGAGGAGCCAAACAAGAATTACTTCTCTGTATTATGGGTCATACCCAAGATCTTAAACGCAGTTTGGGAGCTTGTGAGAGGATTCTTTCTCCCATTGGTTAAAGGCAAAGAATACAAAGACACTTGGTTGATGACACTGGCTAGGTTTGTTGGATTGATAATTCCAGGAGTATCAGCACATCTTCCCCCAGATTATGTCAATGTTACTCGACTGGGATCATTGCGAGAAATTCAGGATCTTTCCGTTTCAGAAACCTCAAAAACTGATTAA 1437 0.4141 MSCKELFGGTYLLLNPQEATLLDLLRLLFSSKLQNRSFIECPVDIKAEEFRQRWLLFTSIVAQKLLFTSGNTMKMVGGNLELWLNTLSSNGGFLGLFKNKLKGKVITPDASSATFMSVAGFLDYRVDLDKSIQDKNDDAKYKALLSMMASKFSYENEEYVGNAIRNHWHMKFWGLYSFWNDFQELWSTKAIILQDTKTKPNLIVVAFRGTQPFNSAQWITDVDLSWYELPNVGKIHSGFMKALGLQKNGGWPKEIDQTSKSNHIYAYYTLREELKTMLHANEDAKFIVTGHSLGGALAILFAAILTLHEEAWLLDKLEGVYTFGQPRVGDQAFGDFMKESMRKYDVKYRRYVYCNDLVPRIPYEDKTLFFKHFGPSLYFNSLYQGQVLEEEPNKNYFSVLWVIPKILNAVWELVRGFFLPLVKGKEYKDTWLMTLARFVGLIIPGVSAHLPPDYVNVTRLGSLREIQDLSVSETSKTD* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3527 478 Gene3D alpha/beta hydrolase 130 405 IPR029058 -
Ahy16g3527 478 CDD Lipase_3 140 380 - -
Ahy16g3527 478 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 7 469 - -
Ahy16g3527 478 Pfam Lipase (class 3) 204 365 IPR002921 GO:0006629
Ahy16g3527 478 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 7 469 IPR044819 GO:0004806|GO:0006629
Ahy16g3527 478 SUPERFAMILY alpha/beta-Hydrolases 143 397 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3527 Ahy-Chr16 152820001 152827919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3527 10 463 Acyl Lipid Metabolism Gene Families AT1G56630 53.632 0.0 516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3527 16 152820001 152827919 Ahy16g3527 16 152820001 152827919 ECH
Ahy16g3527 16 152820001 152827919 Ahy6g2774 6 113515996 113523914 hybridization