Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3515 ATGGAACAAGAAGAAGAACCACAACAAAATGAGCCACCTCACTCTCACTCTCAATCTCGGTGCGTGACGCTACCTCCCGGTTGCCGGTTCCATCCTTCGGAGGAGCTTCTATTGCGTTACTACCTGACCAACAAAAACGGCACGGGGAACTGGAATGGTAACGGTGGTTTGGGATTCGATGGTTCTGATTTGATTCGGGAGCTGGATTTTTACGATTACGATCCTTTTGAACTGCCGGATTTTGCGTGCTTTGCGTACGGCTACGGCGGAAGGAGGAGGCACTGGTACTGTTTCACCTCCGTTAGGGTTTCGAGGGGAGAGAGGTGGAAGAGGAAGAGGAAGGTTAAGAGTGGGTTCTGGTTGAGGAGGGGAAGGGTTTCGAATGTTAACGGTGTTGGGGAGAACGTGGTTTTGGGAACGAGGACGAGGTTCGTTTTCTATATGGGTGATTCGGCGAAGAACGGTGCCAGGACGGATTGGGTTTTGTATGAATACGCATTGGTTGATCATGTTATGGCCTCTTATGTTCTTTGCCGGGTATTTAGTAAGCCTCGTTATAAGAATAGTGCATCAGACATCGGCCTGAGTTGTTGTGCAGAAGAGAGTGTATCAGCAGTGCGCCATATTGGTATTCAGCATGATGAACATGTTAAATTGGATGCCGTTGAAGCTAAAGTATGTGATGATATCTCCATTGACCACAACAATGAAATATGTGCTGGTGGAAACAGCGATAATGATAATCAAGTTAAGAATGCACATGATATAGATGCTCTACGTTGTTTGGCGGGTCCTCAGGGCAGTCAGCAGCTATCAATTGCAAACTTCTACATCAGCAATAATCTGAAAAGTCTAGTCAGAAATGGGGCTATCAGTGAAAGGCTTCCTTTACTCCCCAGCAGTAGTACAATGTTCATTGAAGCAATTTCATCTCCACAACAATTACTTTCCATCACGGAGGAAGACTTCATAGAGTTGAATGATCTTACATGA 993 0.4582 MEQEEEPQQNEPPHSHSQSRCVTLPPGCRFHPSEELLLRYYLTNKNGTGNWNGNGGLGFDGSDLIRELDFYDYDPFELPDFACFAYGYGGRRRHWYCFTSVRVSRGERWKRKRKVKSGFWLRRGRVSNVNGVGENVVLGTRTRFVFYMGDSAKNGARTDWVLYEYALVDHVMASYVLCRVFSKPRYKNSASDIGLSCCAEESVSAVRHIGIQHDEHVKLDAVEAKVCDDISIDHNNEICAGGNSDNDNQVKNAHDIDALRCLAGPQGSQQLSIANFYISNNLKSLVRNGAISERLPLLPSSSTMFIEAISSPQQLLSITEEDFIELNDLT* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3515 330 Pfam No apical meristem (NAM) protein 25 167 IPR003441 GO:0003677|GO:0006355
Ahy16g3515 330 MobiDBLite consensus disorder prediction 1 21 - -
Ahy16g3515 330 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 21 329 - -
Ahy16g3515 330 SUPERFAMILY NAC domain 20 183 IPR036093 GO:0003677|GO:0006355
Ahy16g3515 330 Gene3D NAC domain 33 187 IPR036093 GO:0003677|GO:0006355
Ahy16g3515 330 ProSiteProfiles NAC domain profile. 24 183 IPR003441 GO:0003677|GO:0006355
Ahy16g3515 330 PANTHER NAC DOMAIN-CONTAINING PROTEIN 21/22-LIKE ISOFORM X1 21 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3515 Ahy-Chr16 152695665 152699871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3515 23 184 NAC Transcription Factor Family AT1G71930 31.737 1.20e-20 89.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy16g3515 NAM 6.30E-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3515 16 152695665 152699871 Ahy16g3515 16 152695665 152699871 ECH
Ahy16g3515 16 152695665 152699871 Ahy6g2762 6 113391660 113395866 hybridization