Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3513 ATGAAGGTGCATCAATTCACACGTGGATTATGGGAGCATGAACCTTCTCTCACGCTTGGGTGCAAAAGATTACGCCCTCTTGCTCCTAAGCTTAGTAGCTATTCTTCTTCTTCTAATAATAATAATAATAATAATTCTCCTTCTTCTTCTTCTTCTCTTGCTTCTTTTGATCTTAAGAGCTTCATTAGACCTGAAAGTAGCAAACTTGGATCATCATCCTCTTCTGATGATGATAACAACATCAACAACAATAATAATATTATTAAGAGGGATCCACCTTCATCATCACCACCAGGGAGCCAGGTGGAAACACATCCAGGAGGAACAAGGTGGAACCCTACACAAGAACAGATAGGGATACTTGAGATGCTCTATAGAGGTGGAATGAGAACACCAAATGCTCAACAAATAGAACAGATCACTGCTCAATTAGGCAAATACGGCAAGATTGAGGGTAAAAATGTCTTCTATTGGTTCCAAAACCACAAAGCACGTGAGAGACAAAAGCAGAAGCGTAACAGCCTTGGACTTTCTCATACTCCTAGAACTCCGGCCGCCGTCGCCGCCACCGCCGCAACCACAACAATAGTGTCTTCACCCACCTTTGCTGCTAGCTTAAGTTTTGAGACCTCAAGGGGAGAAGTAATTGAAAGAGATCATGAAGATAGCCCTTACAAGAAGTGTAGGAGTTGGGTATTTGAGTATATGGAAGATCAAAGTTGGTCATCATCATCATCATCTAGCAAAGAGGAGGAACATAAAACCCTAGAGCTTTTCCCATTGCACCCGGAGGGCAGATGA 801 0.4245 MKVHQFTRGLWEHEPSLTLGCKRLRPLAPKLSSYSSSSNNNNNNNSPSSSSSLASFDLKSFIRPESSKLGSSSSSDDDNNINNNNNIIKRDPPSSSPPGSQVETHPGGTRWNPTQEQIGILEMLYRGGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNSLGLSHTPRTPAAVAATAATTTIVSSPTFAASLSFETSRGEVIERDHEDSPYKKCRSWVFEYMEDQSWSSSSSSSKEEEHKTLELFPLHPEGR* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3513 266 SMART HOX_1 106 173 IPR001356 GO:0003677
Ahy16g3513 266 Gene3D - 108 175 - -
Ahy16g3513 266 SUPERFAMILY Homeodomain-like 103 174 IPR009057 -
Ahy16g3513 266 MobiDBLite consensus disorder prediction 32 53 - -
Ahy16g3513 266 Pfam Homeodomain 109 168 IPR001356 GO:0003677
Ahy16g3513 266 MobiDBLite consensus disorder prediction 237 266 - -
Ahy16g3513 266 MobiDBLite consensus disorder prediction 65 113 - -
Ahy16g3513 266 ProSiteProfiles 'Homeobox' domain profile. 104 169 IPR001356 GO:0003677
Ahy16g3513 266 CDD homeodomain 109 170 IPR001356 GO:0003677
Ahy16g3513 266 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 266 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Ahy16g3513 266 MobiDBLite consensus disorder prediction 247 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3513 Ahy-Chr16 152680705 152683626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3513 1 175 Wox Gene Family AT1G46480 60.773 5.04e-64 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Ahy16g3513 Homeodomain 6.80E-19 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3513 16 152680705 152683626 Ahy16g3513 16 152680705 152683626 ECH
Ahy16g3513 16 152680705 152683626 Ahy6g2760 6 113376700 113379621 hybridization