Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3509 ATGATCCAATGGATACATGTGGCGGTTTTAGGAGCATCTTTGGGGTGTGTTTCAACCCTTTTCATGGTTTTCATTTGGCGTTGGTGTCATCAAAGAAAAGATCATCATAGAAACTTTGTTGTTGAACCAAAGAGTTTCACTAGAATGGAGACCATTAATCAAGCTGGAATTGATGATGATCACAAGAACAATAGCAGCAAATTCTATGTTTTTCATGGTTCGGAAAAAACAAGAACATTGTTCAGTTGGGAAGATCATCCATATCTTGCTGCTGATGCTGTTGAAAATGGATGGTCAAGATTTAATTTCATGGCTCACAAGAGTTACAACATTATTCAATCATCAAGATCAAGATCAACAACAAGTACCCTTTTAGGAGCTTGTGCTGTTGTTGATGATGATGATCATGGAAGAGGGATTGAAATTGAGCCTGAGATAACCTTTGAAGTTTGTCAGGATTCATCTGAGTTTATGCAGAAGATTAGGCTCAATCCTGGTTTGAAGAAGAAAAACTCTGCTTCTATGATGATTATGAGAACTTCTCTACCTTTACCTGGTCCTTGTTTGGGAAACTATGCATTCCCACAAGAAGCATATTTTGAAGTTACAATCTTGTGTTCTTCTTCTTCTTCTTCTTTTGATGATGATTGTAAGAGAAGTAGTGAAGGTGAGAAGACAAAGCTTTTAGTTCAAGATGATGGTTTGAATTGTAAGAAGGGTATTTTGGACAATGTTGATGAAGAAATGATGAGGGTTGAATGTTGCAAGGAGGGTAGAAATGGAAAGATTGGATCTTTGGTGATGTTTTCTTTGGGGCTATCAAGAGGAGGAGGAGATGTTCCTTTGAGAGTTCCTGGGAGCTACCATGGAAGCATAGGCTTCAACTCCAATGGCTCTGTTTTTCTTGATGGAATGAAACTAGTAACTGAGTCCAAGAAGGAAGAAGAAGAAGAATGGATGATAGGAAGTGAGAAAGTAATTGGTTGTGGATTTGATCCAAGGCAAAAACAGGTGTTCTTCACATTAAATTCAGAATTGGTTCATGAAATCCATTGCCAATCAGATGAATTTAGCACTCCACTATATCCAACATTGGCTTCAAATATAGACATTATAGTTTTGATTAATTTTGGACAAAGTTCGTTCAAATATGAACCTGCTAATGCACATAGGACACCAAATCCATGTTTCATGGGCCCAATTGTAAATTCCCATAATGCAAAATTGGGCTATGATGATAGCAAGGAACTCTTCTCCATGGGAAGGATTGATTCTCAGTGGCATAATGGTAAATCTACACCCAAAGGGAATATTATTCCAAATCATGTAGCCTTTGATTTTGACGAGGAATCTGAGGCTGATCTATTTGAAATAGTCTTGGATGATTCTGGAAAATCTCCTAACATAGTTTCATAG 1416 0.3743 MIQWIHVAVLGASLGCVSTLFMVFIWRWCHQRKDHHRNFVVEPKSFTRMETINQAGIDDDHKNNSSKFYVFHGSEKTRTLFSWEDHPYLAADAVENGWSRFNFMAHKSYNIIQSSRSRSTTSTLLGACAVVDDDDHGRGIEIEPEITFEVCQDSSEFMQKIRLNPGLKKKNSASMMIMRTSLPLPGPCLGNYAFPQEAYFEVTILCSSSSSSFDDDCKRSSEGEKTKLLVQDDGLNCKKGILDNVDEEMMRVECCKEGRNGKIGSLVMFSLGLSRGGGDVPLRVPGSYHGSIGFNSNGSVFLDGMKLVTESKKEEEEEWMIGSEKVIGCGFDPRQKQVFFTLNSELVHEIHCQSDEFSTPLYPTLASNIDIIVLINFGQSSFKYEPANAHRTPNPCFMGPIVNSHNAKLGYDDSKELFSMGRIDSQWHNGKSTPKGNIIPNHVAFDFDEESEADLFEIVLDDSGKSPNIVS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3509 471 SMART SPRY_3 195 381 IPR003877 GO:0005515
Ahy16g3509 471 Pfam SPRY domain 286 379 IPR003877 GO:0005515
Ahy16g3509 471 SUPERFAMILY Concanavalin A-like lectins/glucanases 283 384 IPR013320 -
Ahy16g3509 471 Gene3D - 160 392 IPR043136 -
Ahy16g3509 471 PANTHER RAN BINDING PROTEIN 9-RELATED 2 465 - -
Ahy16g3509 471 PANTHER SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN PROTEIN 2 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3509 Ahy-Chr16 152614557 152617904 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3509 16 152614557 152617904 Ahy16g3509 16 152614557 152617904 ECH
Ahy16g3509 16 152614557 152617904 Ahy6g2756 6 113310552 113313899 hybridization
Ahy16g3509 16 152614557 152617904 Ahy17g3269 17 134908310 134910805 PCT
Ahy17g3269 17 134908310 134910805 Ahy16g3509 16 152614557 152617904 PCT