Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3497 ATGGCTTCATCCTACACCATCCTCCTCTTCTTCTTCACTCTCTTCACTCTTTCATATGCATCAGACATGTCCATAATCTCGTACGACAAAACCCACTCCAACACATGGAGAACCGATGAGGAAGTCATGGCTATGTACGAGGAATGGCTTGTGAAGCATGGAAAGAAATCAAGTAACGGTCTCTTAAGTGGCGAGAGCAAGAATCGGTTCGAGATCTTTAAGGATAACCTCCGGTTCATTGATGAACAGAACAGTTTACCGAACCGGACTTTCCAGCTCGGTCTGAACCGGTTCGCCGATCTGACCAACGAGGAGTACAGGGCTAAGTATTTGGGTACCAGGATGGATCCTAACCGTCGGATGATGAAGGCTAAGACCAGGAGCAACCGATACGCGCCACGTGTCGGGGACAAGTTGCCGGAGAGTGTTGATTGGAGGAAGGAAGGTGCTGTTGTTGCAGTCAAAGACCAAGGAGGATGTGGGAGTTGTTGGGCATTCTCAACAATTGCTGCAGTGGAAGGAATAAACAAGATCGTAACAGGGGATCTGATTTCATTATCAGAGCAAGAGCTTGTGGACTGTGATACATCATACAACGAAGGGTGTAGTGGTGGACTCATGGACTATGCCTTTGAGTTCATCATCAACAATGGTGGCATTGACTCTGAAGCCGATTACCCTTACACTGGCTTTGATGGCACATGTGACCAAAACAGGAAAAATGCTAAGGTTGTGAACATTGATGACTATGAAGATGTTCCTGCCTATGATGAATTGGCATTGAAAAAGGCCGTTGCGAATCAGCCAGTGGCAGTTGCCATTGAAGGAGGTGGCAGGGAATTCCAGTTATATGTATCTGGTGTATTCACAGGAAGATGTGGAACAGCATTGGACCATGGAGTTGCTGCTGTAGGGTATGGGACAGAAGGTGGGCATGAGTATTGGATTGTGAGGAACTCATGGGGAGCTAGCTGGGGAGAGGACGGTTACATCCGAATGGAGCGGAATCTTGGTAACAGCAGAGCAGGCAAGTGTGGAATCGCCATCGAGCCTTCTTACCCTATTAAGAATGGCCCCAATCCTCCTAACCCCGGACCATCTCCGCCGTCGCCTGTGAAGCCGCCGTCCGTGTGTGATAACTACTTCAGCTGCCAATCTGGAAACACATGCTGCTGCCTTTTCCAGTTTGGAAATGCGTGCTTTGATTGGGGATGCTGCCCTCTTGAAGGTGCTACCTGCTGTGATGATCACTACAGCTGCTGCCCTGCCGACTACCCCGTTTGTGACACTTTCAGAGGTCTTTGCCTCAAGAACAAGAACAACCCATTCGGAGTGAAGGCGTTGAAGAGAACTGCAGCTAAACCTCACTGGGCCTTCAATGGTGTGAGCAGTGCTTAA 1398 0.49 MASSYTILLFFFTLFTLSYASDMSIISYDKTHSNTWRTDEEVMAMYEEWLVKHGKKSSNGLLSGESKNRFEIFKDNLRFIDEQNSLPNRTFQLGLNRFADLTNEEYRAKYLGTRMDPNRRMMKAKTRSNRYAPRVGDKLPESVDWRKEGAVVAVKDQGGCGSCWAFSTIAAVEGINKIVTGDLISLSEQELVDCDTSYNEGCSGGLMDYAFEFIINNGGIDSEADYPYTGFDGTCDQNRKNAKVVNIDDYEDVPAYDELALKKAVANQPVAVAIEGGGREFQLYVSGVFTGRCGTALDHGVAAVGYGTEGGHEYWIVRNSWGASWGEDGYIRMERNLGNSRAGKCGIAIEPSYPIKNGPNPPNPGPSPPSPVKPPSVCDNYFSCQSGNTCCCLFQFGNACFDWGCCPLEGATCCDDHYSCCPADYPVCDTFRGLCLKNKNNPFGVKALKRTAAKPHWAFNGVSSA* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3497 465 Gene3D Granulin 375 438 IPR037277 -
Ahy16g3497 465 SMART pept_c1 139 355 IPR000668 GO:0006508|GO:0008234
Ahy16g3497 465 Pfam Granulin 389 436 IPR000118 -
Ahy16g3497 465 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 297 307 IPR025660 -
Ahy16g3497 465 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 157 168 IPR000169 -
Ahy16g3497 465 Gene3D Cysteine proteinases 19 357 - -
Ahy16g3497 465 SUPERFAMILY Granulin repeat 375 409 - -
Ahy16g3497 465 SUPERFAMILY Cysteine proteinases 37 355 IPR038765 -
Ahy16g3497 465 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 28 384 - -
Ahy16g3497 465 PANTHER CYSTEINE PROTEASE 28 384 - -
Ahy16g3497 465 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 314 333 IPR025661 -
Ahy16g3497 465 Pfam Cathepsin propeptide inhibitor domain (I29) 46 106 IPR013201 -
Ahy16g3497 465 CDD Peptidase_C1A 140 354 IPR039417 -
Ahy16g3497 465 SMART Inhibitor_I29_2 46 106 IPR013201 -
Ahy16g3497 465 SMART GRAN_2 378 435 IPR000118 -
Ahy16g3497 465 Pfam Papain family cysteine protease 139 355 IPR000668 GO:0006508|GO:0008234
Ahy16g3497 465 PRINTS Papain cysteine protease (C1) family signature 299 309 IPR000668 GO:0006508|GO:0008234
Ahy16g3497 465 PRINTS Papain cysteine protease (C1) family signature 157 172 IPR000668 GO:0006508|GO:0008234
Ahy16g3497 465 PRINTS Papain cysteine protease (C1) family signature 314 320 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3497 Ahy-Chr16 152390159 152394384 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3497 16 152390159 152394384 Ahy11g0985 11 21507498 21511298 ECH
Ahy16g3497 16 152390159 152394384 Ahy19g3277 19 155870831 155873326 ECH
Ahy16g3497 16 152390159 152394384 Ahy16g3497 16 152390159 152394384 ECH
Ahy16g3497 16 152390159 152394384 Ahy6g2744 6 113086154 113090379 hybridization