Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3495 ATGGAAAATGGATCCCTGAAACTCTTCAAGTGGATTGAGATCGGAGAGATTCAGAGCGAGAGAGATACGAATCGGAAGAAACCGAAGAAGAAGACTGAGTCAGTTGTGAAAATGGAAAAATATCTGTCCGCCATTGGTATTGACGTCAGCTGCGCGCTCAATTCTCTCCGCCATGGAACCATCCCTCACAAAGACTGCCTCCTCCCTCTCATCTCCAAGCTCCTCGGCTACGCCATCGTCGCCGCTTCCACCACCGTTAAGCTCCCTCAGATTATGAAGATCCTGAAGCACCAGAGTGTGAGAGGTCTTAGCATGATATCCTTCGAGCTTGAGGTTGTTGGTTATACCATAGCACTGGCTTACTGTCTCCACAAGGGGCTTCCCTTCTCTGCTTATGGGGAACTGTTGTTTCTGTTGATCCAAGCTTTAATTTTGGTTGCCATAATCTACTACTATTCTCGACCTTTGCGTACCACAACATGGATCCGAGCATTAATATATTGTGCTGTAGCACCGACTATCTTAGCTGGTCAAATTGATCCTTTTCTCTTTGAGGCTTTGTATGCATCCCAGCATGCGATCTTTCTCTTTGCCAGAATCCCTCAAATATTGAAAAACTTTTCTAACAGGAGTACAGGGGAGCTCAGCTTCTTAACTTCTTTGATGAATTCTGCAGGTTCAATGGTTAGAGTATTCACAAGCCTCCAAGAAAATGCACCAAAAAGTGTTGTAATGGGTTCCGCAATTGGTGTTGCTACAAATTTCACCATCCTAAGCCAGATATTGTTCTACCAAAAGCCAAGGGTCACTGAGAAAGAGAAGAAAACGAAATAG 834 0.446 MENGSLKLFKWIEIGEIQSERDTNRKKPKKKTESVVKMEKYLSAIGIDVSCALNSLRHGTIPHKDCLLPLISKLLGYAIVAASTTVKLPQIMKILKHQSVRGLSMISFELEVVGYTIALAYCLHKGLPFSAYGELLFLLIQALILVAIIYYYSRPLRTTTWIRALIYCAVAPTILAGQIDPFLFEALYASQHAIFLFARIPQILKNFSNRSTGELSFLTSLMNSAGSMVRVFTSLQENAPKSVVMGSAIGVATNFTILSQILFYQKPRVTEKEKKTK* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3495 277 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 PROTEIN HOMOLOG 1 41 266 - -
Ahy16g3495 277 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED 41 266 IPR016817 -
Ahy16g3495 277 Gene3D - 69 153 - -
Ahy16g3495 277 PIRSF Mpdu1 37 277 IPR016817 -
Ahy16g3495 277 Pfam PQ loop repeat 71 130 IPR006603 -
Ahy16g3495 277 Pfam PQ loop repeat 192 242 IPR006603 -
Ahy16g3495 277 Gene3D - 191 276 - -
Ahy16g3495 277 SMART ctns 85 116 IPR006603 -
Ahy16g3495 277 SMART ctns 197 228 IPR006603 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3495 Ahy-Chr16 152371760 152375311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3495 45 264 Miscellaneous Gene Families AT4G07390 76.818 1.39e-124 353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3495 16 152371760 152375311 Ahy16g3495 16 152371760 152375311 ECH
Ahy16g3495 16 152371760 152375311 Ahy6g2742 6 113067755 113071306 hybridization