Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3491 ATGGCACATCATCATCATCATCAACACCACACAGATTCTTTGTACTGCTCAGAACAACATTATTTTGATGATGAGGAACATGATCATGTGTTTCTAGAACAAGACATGTTTTGTGATGATTCAGAGTTGAAAACTCTTGTTTCAAAAGAACAAGAACAAGAGAAGAAACTCAGCATCATTCTTTGCATTGATGAGTGGGAAAGAAGAGAAGCAGTTGAATGGATTCTTAGAGTGAATGCATATTTCTCATTCTCTGCTCTCACAGCTTCTCTTGCTGTTAACTACCTTCACAGATTCCTCTTCACCTTCACCATGAAGAAGCAGCAGCCATGGTTGACTCATCTTGCTGCAGTTGCTTGCATCTCTCTTGCTGCTAAAATGGAAGAGACCCAAGTTCCTCTTCCTCTTGATTTACAAGTGGAGGACAGCAAATATGTGTTTGAGGCAAAAACAATAAAGAAAATGGAGATTTTGGTACTTTCAACTCTTGAGTGGAAGATGAATCCACCAACACCTCTCTCTTTCATTGATTACATCACAAGAAGACTTAAATGTTTTCACTTCCTCAACACATGTCAGTCTCTTCTTCTTTCTCTCTTACCAGATTCCAGGCTTATTGGCTATCTTCCTTCTGTGTTGGCAACTGCTACAATGATGCATGTAGTTAACAACAATGTGGAGCCTTATCTTGCATCTGAATACCAAAATCAGTTCTTGGGTATTCTTGAAATCAACAAGGAGAAGTTAGAAGAATGCTACAATCTCATATTGGAGGTTGTATCAGAGTCAGGATTCAACTACAAAGAATCCAAAAAACGCAATTTTGGATCAATTATTATTCCTAGTAGCCCAAGTGGTGTAATTGATGTGTCATTTAGCTTTGATCATCATGATAGCTCTAATGATTCATGGGAAGTAGTATCTGCTAATGATTCTGTTTCATCAACACCAAACAGCATCAACAAGAAGAGGCCTAGGACTCAAGAACACACTGCTTCCTTTGAACAATTCAAGCAATGA 1020 0.3833 MAHHHHHQHHTDSLYCSEQHYFDDEEHDHVFLEQDMFCDDSELKTLVSKEQEQEKKLSIILCIDEWERREAVEWILRVNAYFSFSALTASLAVNYLHRFLFTFTMKKQQPWLTHLAAVACISLAAKMEETQVPLPLDLQVEDSKYVFEAKTIKKMEILVLSTLEWKMNPPTPLSFIDYITRRLKCFHFLNTCQSLLLSLLPDSRLIGYLPSVLATATMMHVVNNNVEPYLASEYQNQFLGILEINKEKLEECYNLILEVVSESGFNYKESKKRNFGSIIIPSSPSGVIDVSFSFDHHDSSNDSWEVVSANDSVSSTPNSINKKRPRTQEHTASFEQFKQ* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3491 339 CDD CYCLIN 68 160 IPR013763 -
Ahy16g3491 339 SMART cyclin_7 73 161 IPR013763 -
Ahy16g3491 339 SUPERFAMILY Cyclin-like 152 261 IPR036915 -
Ahy16g3491 339 Pfam Cyclin, N-terminal domain 47 168 IPR006671 -
Ahy16g3491 339 SUPERFAMILY Cyclin-like 40 168 IPR036915 -
Ahy16g3491 339 SMART Cyclin_C_2 170 283 IPR004367 -
Ahy16g3491 339 MobiDBLite consensus disorder prediction 305 322 - -
Ahy16g3491 339 Gene3D - 43 254 - -
Ahy16g3491 339 PANTHER CYCLINS 29 323 IPR039361 -
Ahy16g3491 339 Gene3D - 56 168 - -
Ahy16g3491 339 PANTHER CYCLIN D3.1 PROTEIN 29 323 - -
Ahy16g3491 339 Pfam Cyclin, C-terminal domain 170 268 IPR004367 -
Ahy16g3491 339 MobiDBLite consensus disorder prediction 305 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3491 Ahy-Chr16 152326985 152329557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3491 12 274 Core Cell Cycle Gene Families AT4G34160 48.084 6.63e-86 262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3491 16 152326985 152329557 Ahy15g0606 15 7688950 7691556 ECH
Ahy16g3491 16 152326985 152329557 Ahy11g0990 11 21778015 21780076 ECH
Ahy16g3491 16 152326985 152329557 Ahy19g3278 19 155886328 155888273 ECH
Ahy16g3491 16 152326985 152329557 Ahy16g3491 16 152326985 152329557 ECH
Ahy16g3491 16 152326985 152329557 Ahy6g2738 6 113022980 113025552 hybridization
Ahy16g3491 16 152326985 152329557 Ahy17g3258 17 134724152 134725527 PCT
Ahy16g3491 16 152326985 152329557 Ahy8g0977 8 18826146 18827786 PCT
Ahy17g3258 17 134724152 134725527 Ahy16g3491 16 152326985 152329557 PCT
Ahy8g0977 8 18826146 18827786 Ahy16g3491 16 152326985 152329557 PCT