Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3490 ATGGGTGGTTGGGCTATTGCTGTGCATGGCGGAGCTGGTGTTGACCCTAATCTCCCCCTCCATCGTCAAGAAGAAGCCAAACAACTCCTCACTCGCTGTCTCAATCTCGGCATCTCTGCCCTCAATTCTAATCTCCCTGCCATCGACGTCGTCGAACTCATCGTCAGGGAATTGGAAACAGATCCATTGTTCAATTCAGGGCGTGGATCTGCCCTAACGGAAAAAGGAACTGTGGAGATGGAGGCTAGCATAATGGATGGCCCAAAGAGGCGATGCGGCGCCGTTTCGGGTCTCACCACCGTTAAGAACCCAGTCTCTCTGGCCCGTTTGGTTATGGAAAAATCCCCACATTCCTACCTCGCTTTCTCTGGCGCCGAAGACTTCGCTAGACAACAGGGAGTGGAGGTTGTGGACAATGAATACTTCATAACCCCAGAAAACGTTGGCATGCTCAAATTAGCAAAGGAAGCAAATGCAATCCTGTTTGATTACCGAATTCCCAATGGATGCGAGACAACATGCGGTGCAAATGTGGAGTCCCCACTCCACATGAACGGTCTTCCCATCAGCGTATACGCACCGGAGACGGTGGGTTGCGTGGTGGTGGACCGGGAGGGACGTTGCGCGGCCGCCACATCAACTGGTGGCCTCATGAACAAGATGGCGGGTCGCATCGGCGACTCGCCCTTGATAGGCTCTGGGACCTATGCATGTGACCTATGTGGGGTCTCGTGCACCGGCGAGGGCGAGGCTATCATTCGCGCCACGCTGGCGCGCGAGGTCGCCGCCGTGATGGAGTACAAGGGACTTGGGCTCCAAGAGGCAGTGGATTTTTGCATCAAAACTAGGCTTGATGATGGGAAAGCTGGCCTAATTGCTGTGTCTAAAAATGGTGAAGTGGCTTATGGGTTTAATTGTAATGGCATGTTTAGGGGTTGTGCCACAGAGAATGGGTTCATGGAGGTTGGAATTTGGGAATGA 981 0.5331 MGGWAIAVHGGAGVDPNLPLHRQEEAKQLLTRCLNLGISALNSNLPAIDVVELIVRELETDPLFNSGRGSALTEKGTVEMEASIMDGPKRRCGAVSGLTTVKNPVSLARLVMEKSPHSYLAFSGAEDFARQQGVEVVDNEYFITPENVGMLKLAKEANAILFDYRIPNGCETTCGANVESPLHMNGLPISVYAPETVGCVVVDREGRCAAATSTGGLMNKMAGRIGDSPLIGSGTYACDLCGVSCTGEGEAIIRATLAREVAAVMEYKGLGLQEAVDFCIKTRLDDGKAGLIAVSKNGEVAYGFNCNGMFRGCATENGFMEVGIWE* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3490 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Ahy16g3490 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 323 IPR029055 -
Ahy16g3490 326 Gene3D (Glycosyl)asparaginase 196 326 - -
Ahy16g3490 326 CDD Asparaginase_2 5 318 - -
Ahy16g3490 326 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 326 - -
Ahy16g3490 326 PANTHER L-ASPARAGINASE 1 326 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3490 Ahy-Chr16 152281607 152283987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy16g3490 6 260 Miscellaneous Gene Families AT4G00590 29.856 1.15e-18 84.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3490 16 152281607 152283987 Ahy16g3490 16 152281607 152283987 ECH
Ahy16g3490 16 152281607 152283987 Ahy6g2737 6 112988029 112990425 hybridization
Ahy16g3490 16 152281607 152283987 Ahy17g3257 17 134690583 134692445 PCT
Ahy16g3490 16 152281607 152283987 Ahy8g0976 8 18792293 18794011 PCT
Ahy17g3257 17 134690583 134692445 Ahy16g3490 16 152281607 152283987 PCT
Ahy8g0976 8 18792293 18794011 Ahy16g3490 16 152281607 152283987 PCT