Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g3486 ATGGACAACTCCATGCCTATGTTATCATGTTTGTTATTCTTGTTTTTGCAATGTGGCTTCTCTTCTTCAAACATGGACATCTTCATCCTTGCCGGACAAAGCAACATGGCTGGTCGTGGCGGCGTCAAAAACGGGAGGTTTTGGGACGGTAATGTCCCACCAGAGTGCCGGTCCAACCCTTCTATCTTGCGACTAAGTGCGAGTCTACAATGGGAAGAGGCCCATGAGCCTCTCCATTTAGACATCGACCTTGGCAAGACTTGTGGGGTTGGACCGGGTCTGGCGTTCGCAAACGAAGTTCTCAGGATCAAAGGTGAGAGTGTTAATATGGTGATGGGTTTGGTGCCTTGTGCAAAGGGAGGGACTAAGATTGGGGAATGGAGTAAAGGGACAAGTTTGTACAATGAATTGGTGAGAAGGGCAATTGAGTCAGTGAAGGGTAATAGTGGAAGAACAATTAGGGCACTTTTGTGGTATCAAGGTGAGAGTGACACTGTTAGAGAAGAGGATGCTGAAGGTTATAGCCATAACATGGAGAAATTTATTATGGACCTTCGTTCTGATCTTCATCTTCCAAATCTTCTTGTTATCCAGGTAGCACTTGCATCAGGGGAAGGAAAATACATTGAGAAAGTGAGAAAGGGTCAATTAGGGTTGAAGCTTCCAAATGTGAAGTGTGTTGATGCAAAGGGTTTGCCCCTCAAAACAGATAAACTTCACCTTACTACAGTCTCTCAAGTTCACTTAGGAATGCGTTTGGCTCATGCCTATATTGCTTCCACCACTCATCATCATCATCATCAATTTATTAATCACTCACTCACAAGTTATGTAACTAGTTAA 843 0.4401 MDNSMPMLSCLLFLFLQCGFSSSNMDIFILAGQSNMAGRGGVKNGRFWDGNVPPECRSNPSILRLSASLQWEEAHEPLHLDIDLGKTCGVGPGLAFANEVLRIKGESVNMVMGLVPCAKGGTKIGEWSKGTSLYNELVRRAIESVKGNSGRTIRALLWYQGESDTVREEDAEGYSHNMEKFIMDLRSDLHLPNLLVIQVALASGEGKYIEKVRKGQLGLKLPNVKCVDAKGLPLKTDKLHLTTVSQVHLGMRLAHAYIASTTHHHHHQFINHSLTSYVTS* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g3486 280 PANTHER OS06G0729725 PROTEIN 8 262 - -
Ahy16g3486 280 Gene3D SGNH hydrolase 24 260 IPR036514 -
Ahy16g3486 280 SUPERFAMILY SGNH hydrolase 25 264 - -
Ahy16g3486 280 PANTHER ESTERASE, PUTATIVE (DUF303)-RELATED 8 262 - -
Ahy16g3486 280 Pfam Carbohydrate esterase, sialic acid-specific acetylesterase 25 258 IPR005181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g3486 Ahy-Chr16 152234707 152238429 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g3486 16 152234707 152238429 Ahy16g3486 16 152234707 152238429 ECH
Ahy16g3486 16 152234707 152238429 Ahy6g2735 6 112965720 112969370 hybridization
Ahy16g3486 16 152234707 152238429 Ahy17g3256 17 134679089 134682070 PCT
Ahy16g3486 16 152234707 152238429 Ahy8g0975 8 18768962 18772291 PCT
Ahy17g3256 17 134679089 134682070 Ahy16g3486 16 152234707 152238429 PCT
Ahy8g0975 8 18768962 18772291 Ahy16g3486 16 152234707 152238429 PCT