Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0122 ATGACTATGAATTATGAAAACTACTTTAATATACTTTGCTTTGCTTTCAGCCTTTCTCTCACACACACACACATAACTACGGTTTATAAGATGGGTTCTCTGCAAGGACCAGTTTTGTGCCCTTCTGTTCATGCTAAACTAGCAGGGTTGTTCAGCCTTCCTATGATTGGACCAATGAATGTTAGCTGTGTTAGAAGTGAATTCTGGGGATTCAAGGAACTCGGTGGCGGCAGCGGCGGTGGTGCAAAAGTAAAGCCAGGGATCCTTTCTTGCAATGTGCACATGAGGAAGTGCAAGACAGCAGTGCATTGTAGTTTCAACTCGTCTTCGAATGACAGCAGTGGAAGTGCCGCGGAGAATTTCAATGAGAAAGATGAAGATTATGTCAACTCTAGCATTGTTGAAGCTGTTGAGGTGAAGAGCGGAGCAGATGGCTTCATAATCAAAATGAGGGACGGAAGACACTTACGATGTGTTCATAACAATCCTCAGGGAGGGCATCTTCCAGAGTATGCACCACATCCTGCTATTGTTTTGAAGATGGAAGATGGCACCGGCTTGCTTCTGCCGATAATTGTTTTGGAGATGCCGAGCGTTTTACTAATGGCAGCCATGCGCAATGTTCCCATAGCTAGGCCTACTTTATATCAAGTAGTGAAGGAGATGGTTGACAAGATGGGTTACGAAGTTAGACATGTCAGGGTTACAAGAAGAGTTCATGAGGCATATTTCGCTCAGTTGTATCTTACCAAGGTTGGAAACGAGGCAGAGTCTATGAGCTTTGATCTTCGACCTTCGGATGCTATCAATATTGCAGTAAGATGCAAGGTGCCAATTCAAGTCAACAAATACTTGGCATTCAGTGATGGAATGAGAGTAGTTGAATCTGGAAAGCTTTCGACGCAGTTCCCTTTGGACGGTCAAATATTTGCCGAATTGGACAAGCCAAGTGGTCAGCCTTGTGTTGAAACTCAGGAGTTCAATCTCTTGCATGAAATGCTGAAAGCTGTTAACGAAGAGCGCTATCAAGATGCCGCTTTGTGGAGGGACCAACTCAATCAACTTAGGTCTGGAAAAAATGTGAATAACAGATAA 1095 0.4384 MTMNYENYFNILCFAFSLSLTHTHITTVYKMGSLQGPVLCPSVHAKLAGLFSLPMIGPMNVSCVRSEFWGFKELGGGSGGGAKVKPGILSCNVHMRKCKTAVHCSFNSSSNDSSGSAAENFNEKDEDYVNSSIVEAVEVKSGADGFIIKMRDGRHLRCVHNNPQGGHLPEYAPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAMRNVPIARPTLYQVVKEMVDKMGYEVRHVRVTRRVHEAYFAQLYLTKVGNEAESMSFDLRPSDAINIAVRCKVPIQVNKYLAFSDGMRVVESGKLSTQFPLDGQIFAELDKPSGQPCVETQEFNLLHEMLKAVNEERYQDAALWRDQLNQLRSGKNVNNR* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0122 364 Gene3D Bifunctional nuclease domain 163 299 IPR036104 GO:0004518
Ahy16g0122 364 ProSiteProfiles Bifunctional nuclease (BFN) domain profile. 158 293 IPR003729 GO:0004518
Ahy16g0122 364 Pfam UvrB/uvrC motif 332 356 IPR001943 GO:0005515
Ahy16g0122 364 PANTHER VON HIPPEL-LINDAU PROTEIN 31 362 - -
Ahy16g0122 364 PANTHER NUCLEASE IN BASAL DEFENSE RESPONSE PROTEIN 31 362 - -
Ahy16g0122 364 SUPERFAMILY Hypothetical protein TM0160 158 297 IPR036104 GO:0004518
Ahy16g0122 364 Pfam Bifunctional nuclease domain 177 285 IPR003729 GO:0004518
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0122 Ahy-Chr16 1202536 1206398 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0122 16 1202536 1206398 Ahy16g0122 16 1202536 1206398 ECH
Ahy16g0122 16 1202536 1206398 Ahy6g1213 6 17988907 17992721 hybridization