Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ahy16g0117 | ATGGGATCAGCTTGCTGTGTTGCTGCGAAGGGTCGCAGTGTACCTAAAAGAACCGGAGAGAAAGGTTTGCATCAAGCTGGATATTCACCGAAATGTGGCTCTGGATTGAATGGTAATCATGTGCCTATCACCAGGGAGAACGAGAATCCCACCTGTCAGAACTCTCACTTGACTAGCAGAAATGTGAGCATGGAATTTAAAGGTCCATTAAGTTCTGAAAGAGGTCATTTATCAGATGGAGGAAGCACCCTGGAGAATTCTGCAACTCCAATATCTCAGAAGTCCCCTTTTGATGACACATTTGTTCCAAATCTGATGGCTACTCCATCTGTGCCTGCACTAGATCATCATTCTAATTCTACACCATCAAGACGGGCACATCGATCTCCAGGTCATCCACTATTAAGACAGATTTCAGATAGTCAGATCTTGGGTCTGAAATCACCGGGCTACTCGATTTCTGAGGGAAGGCCATCATTTGTATTCTCCCCCTGTAGCAATGAAATGGCAACAGGATCCCTATATGGATCATCCGATGGCTGGTCCATGCGCACCTTTTCAGAGATGGTGGTTTCTTCTCAAAGGGAAATATGCTCTTCCGACAGTGAATATTTAGGATCCGGTCGTCACAAGATAATTGGATCCAGCAGCAGCAGGTTCTTGCATTCTCCCTCAATGGATCAACAATCTTGTCCAGCTTGCGCGAGGCCTTTGACAGAACTACCAAATATTGTTGCCAGAAGTGATGTCTCATGTGTTGCTATCCTTGTGTGTGGCCATGCATATCATGCCGAATGCTTAGAATCTAGAACTGCCGAGGCAAACAAGTTTGATCCAGCATGTCCAGCTTGTATCTTCGGAGATAATCACTCGTCAAAGTCATCCAGAAAAGATATTAGGGTCGAATCGGAGACTTCTAAGGGAAAGCACCAGAAGATATCTCGAAGCCGGGTAGCTGATAGCTACCTTGAATCTGATGTAAGTGTTTCCGAACCACAGAAAGACATTGAAAGAATAGGAAAAGTTTCAAAGATGGAGCCAAGCTCAAGTACTAGGAGCACACATGGAAAGCCATTCTTGAAGAAGCACTTTTCGTTTCGGTCCAAATCAAATCGAACCCTGCCGGAGAATGATACTGCAAGGACAAAGGGCTTTTGGGGAAGACACCGGAAAGAATGA | 1179 | 0.4512 | MGSACCVAAKGRSVPKRTGEKGLHQAGYSPKCGSGLNGNHVPITRENENPTCQNSHLTSRNVSMEFKGPLSSERGHLSDGGSTLENSATPISQKSPFDDTFVPNLMATPSVPALDHHSNSTPSRRAHRSPGHPLLRQISDSQILGLKSPGYSISEGRPSFVFSPCSNEMATGSLYGSSDGWSMRTFSEMVVSSQREICSSDSEYLGSGRHKIIGSSSSRFLHSPSMDQQSCPACARPLTELPNIVARSDVSCVAILVCGHAYHAECLESRTAEANKFDPACPACIFGDNHSSKSSRKDIRVESETSKGKHQKISRSRVADSYLESDVSVSEPQKDIERIGKVSKMEPSSSTRSTHGKPFLKKHFSFRSKSNRTLPENDTARTKGFWGRHRKE* | 393 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ahy16g0117 | 392 | PANTHER | EXPRESSED PROTEIN | 1 | 110 | - | - | |
| Ahy16g0117 | 392 | MobiDBLite | consensus disorder prediction | 291 | 319 | - | - | |
| Ahy16g0117 | 392 | SUPERFAMILY | RING/U-box | 227 | 284 | - | - | |
| Ahy16g0117 | 392 | PANTHER | C3HC4-TYPE RING ZINC FINGER PROTEIN | 1 | 110 | - | - | |
| Ahy16g0117 | 392 | PANTHER | C3HC4-TYPE RING ZINC FINGER PROTEIN | 115 | 386 | - | - | |
| Ahy16g0117 | 392 | MobiDBLite | consensus disorder prediction | 67 | 140 | - | - | |
| Ahy16g0117 | 392 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 212 | 286 | IPR013083 | - | |
| Ahy16g0117 | 392 | ProSiteProfiles | Zinc finger RING-type profile. | 231 | 284 | IPR001841 | - | |
| Ahy16g0117 | 392 | MobiDBLite | consensus disorder prediction | 290 | 392 | - | - | |
| Ahy16g0117 | 392 | PANTHER | EXPRESSED PROTEIN | 115 | 386 | - | - | |
| Ahy16g0117 | 392 | MobiDBLite | consensus disorder prediction | 76 | 99 | - | - | |
| Ahy16g0117 | 392 | MobiDBLite | consensus disorder prediction | 9 | 41 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ahy16g0117 | Ahy-Chr16 | 1126856 | 1130442 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Ahy16g0117 | 16 | 1126856 | 1130442 | Ahy16g0117 | 16 | 1126856 | 1130442 | ECH | |
| Ahy16g0117 | 16 | 1126856 | 1130442 | Ahy6g1220 | 6 | 18106592 | 18109558 | hybridization |