Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0104 ATGGCAGAAGGACAAGTCATCCCTGTTAAAAGCCTTCAGACATGGAAGGATCAACTCAAGTTAGGAACCGATTCCAAGAAGCTGGTTGCGGTGGATTTCACAGCTACTTGGTGTGGTCCATGCCGTTTCATTGGTCCAGTTTTTGCAGATCTTGCTAAGAAGACACCCAATGTAATCTTTCTCAAGGTGGATGTAGATGAAATGAGGGATATTGCTGAGGAATGGGGAGTAGAAGCAATGCCAACCTTCATATTCTTCAAAGAAGGCAAGGCAGTGGATAGGGTTGTTGGTGCCAAGAAGGAAGAACTAGAACATGCAATAGCCAAGCATTCAGCTTCTTATTAA 345 0.4406 MAEGQVIPVKSLQTWKDQLKLGTDSKKLVAVDFTATWCGPCRFIGPVFADLAKKTPNVIFLKVDVDEMRDIAEEWGVEAMPTFIFFKEGKAVDRVVGAKKEELEHAIAKHSASY* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0104 114 PANTHER THIOREDOXIN 2 112 - -
Ahy16g0104 114 TIGRFAM thioredoxin: thioredoxin 23 110 IPR005746 GO:0015035
Ahy16g0104 114 Pfam Thioredoxin 13 108 IPR013766 -
Ahy16g0104 114 ProSiteProfiles Thioredoxin domain profile. 1 112 IPR013766 -
Ahy16g0104 114 PRINTS Thioredoxin family signature 29 37 - -
Ahy16g0104 114 PRINTS Thioredoxin family signature 37 46 - -
Ahy16g0104 114 PRINTS Thioredoxin family signature 76 87 - -
Ahy16g0104 114 Gene3D Glutaredoxin 1 113 - -
Ahy16g0104 114 PANTHER THIOREDOXIN 2 112 - -
Ahy16g0104 114 CDD TRX_family 24 108 - -
Ahy16g0104 114 SUPERFAMILY Thioredoxin-like 3 112 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0104 Ahy-Chr16 1019910 1021326 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0104 16 1019910 1021326 Ahy16g0104 16 1019910 1021326 ECH
Ahy16g0104 16 1019910 1021326 Ahy6g1240 6 18474338 18475284 hybridization
Ahy16g0104 16 1019910 1021326 Ahy17g2335 17 112805895 112806683 PCT
Ahy16g0104 16 1019910 1021326 Ahy8g0082 8 1408677 1409502 PCT
Ahy17g2335 17 112805895 112806683 Ahy16g0104 16 1019910 1021326 PCT
Ahy8g0082 8 1408677 1409502 Ahy16g0104 16 1019910 1021326 PCT