Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0092 ATGGGCACAGGCAGTATATCAGTTGTGATTCTCCTTGTTTTGGTGGGCGGAGACACCGCCTTGTCCGGCGGCGGAGAATGGCAGCTCCTTCAAAAGAGCATAGGCATAGTGGGAATGCACATGCAGCTTCTCCAAAACGACCACATTGTGATATACGACCGCACCGATTTCGGCCTCTCAAACCTCTCTTTACCGAACAACCGTTGCCGCCATAACCAGAGGGAGATGGTTGTCACCATAGACTGCACTGCTCACTCCGTCGAATACGACGTCGTTTCCAACACCTTCAGGCCACTCTTTGTTCAGACTGATGTCTGGTGCTCTTCCGGTTCGGTTTCGCCCAACGGAACTCTTGTTCAGACCGGAGGATTCAACGACGGCGACCGCGCCGTTCGCACCTTCTCGCCGTGTTCGCCAAATGCTACTTGCGACTGGATAGAATTTCCCGGCCAACTCTCCGTCCGCCGGTGGTATGCCACCAACCAAAAGCTACCGGACGGTGGACAAATTGTGATTGGTGGCCGGCGACAATTCAACTATGAATTTTACCCAAACAATGATTTATTAGCAACACAACACATTCATAGTTTACCATTCCTTGTTCAAACAAACGACATTGGAGCAGAGAACAATTTATACCCTTTCGTATTTCTCAATGTTGATGGCAATCTTTTCATCTTTGCCAATAATAAATCCATACTCTTCAATTATGCTAAGAATGTTGTTGTCAAAACTTATCCAGATATTCCAAATGGGGATCCAAGGTGTTACCCTAGCACAGGTTCAGCAGTTATGTTACCATTGAAAATGTTACAAGGTAATAATTCATATGTGGAAGCTGAGGTTTTGGTTTGTGGTGGAGCCCCAAAAAATTCTTTTAAGTATGCTAGGGCGGGTCGGTTTTTCGGAGCTTTGAATACATGCGGTCGGATTAAAATTACCGACCCGAATCCAAAATGGGTTATGGAGACAATGCCTAAGGGTAGGGTCATGAGTGACATGATTATGCTTCCAAACGGCAACGTTTTGATTATAAACGGAGCCGGTTCGGGTACTGCCGGTTGGGGATATGCCCGCGATCCGATTTTGAACCCGTTTCTCTACAAAACGGATAATCCAATTGGGTCAAGATTTGAAGTCCAAAATCCAACTACTATTCCACGTATGTACCATTCAACAGCAATTTTGGTTCGTGATGGTAGGGTTATAGTGGCGGGAAGCAACCCTAATAAGTATTACAATTTCACCAACGTGTTGTTTTTTACTGACTTGAGCGTCGAAGCATTTTCTCCTTCTTATTTGGAACCCGCTTTTGATCATTTACGACCTAGAATTATGTCACAATTTCAAGACCAATTGATTTATGGTCAAATGTTGAGGGTGCAATTTCAAGTGGAAGCAATGTTGGCTCAAGATTTGTTGTATGTGACAATGTTGGCGCCACCTTTTAACACACACTCGTTCTCAATGAATCAAAGATTATTGGTGTTGGAGAAAATTAATGTTACTAAGGTTTTTGGGGCATCAACTTATGAAATTGAGGTTACCACACCAAAGTCACCAATTCTTGCACCACCCGGTTTCTACATAATATTTGTGGTACACCAACAAATTCCTAGTGAGGGTATTTGGGTCCAAATACTTTGA 1647 0.4408 MGTGSISVVILLVLVGGDTALSGGGEWQLLQKSIGIVGMHMQLLQNDHIVIYDRTDFGLSNLSLPNNRCRHNQREMVVTIDCTAHSVEYDVVSNTFRPLFVQTDVWCSSGSVSPNGTLVQTGGFNDGDRAVRTFSPCSPNATCDWIEFPGQLSVRRWYATNQKLPDGGQIVIGGRRQFNYEFYPNNDLLATQHIHSLPFLVQTNDIGAENNLYPFVFLNVDGNLFIFANNKSILFNYAKNVVVKTYPDIPNGDPRCYPSTGSAVMLPLKMLQGNNSYVEAEVLVCGGAPKNSFKYARAGRFFGALNTCGRIKITDPNPKWVMETMPKGRVMSDMIMLPNGNVLIINGAGSGTAGWGYARDPILNPFLYKTDNPIGSRFEVQNPTTIPRMYHSTAILVRDGRVIVAGSNPNKYYNFTNVLFFTDLSVEAFSPSYLEPAFDHLRPRIMSQFQDQLIYGQMLRVQFQVEAMLAQDLLYVTMLAPPFNTHSFSMNQRLLVLEKINVTKVFGASTYEIEVTTPKSPILAPPGFYIIFVVHQQIPSEGIWVQIL* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0092 548 SUPERFAMILY E set domains 438 547 IPR014756 -
Ahy16g0092 548 SUPERFAMILY Galactose oxidase, central domain 87 435 IPR011043 -
Ahy16g0092 548 CDD E_set_GO_C 438 547 IPR015202 -
Ahy16g0092 548 Gene3D - 22 437 IPR037293 -
Ahy16g0092 548 Pfam Galactose oxidase-like, Early set domain 442 547 IPR015202 -
Ahy16g0092 548 PANTHER SECRETED PROTEIN-RELATED 22 547 - -
Ahy16g0092 548 Gene3D Immunoglobulins 441 548 IPR013783 -
Ahy16g0092 548 Pfam Glyoxal oxidase N-terminus 39 287 IPR009880 -
Ahy16g0092 548 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 22 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0092 Ahy-Chr16 877229 880175 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0092 16 877229 880175 Ahy16g0092 16 877229 880175 ECH
Ahy16g0092 16 877229 880175 Ahy6g1255 6 18734566 18737235 hybridization