Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0083 ATGGCGGTGGAGAGTTCACAGGATTTGTTGAAGAAGCTCGAGTACTTGTCTCTCGTTTCGAAGGTTTGCACAGAAATGGAGTCTCACACCGGAAACGCTGATAAGGTACTTGCTGAGTTCATCACCGAGTTGGGTCGATCTTCCGAGAACTTCGAAGAATTCGATGCGAAACTGAAGGAGAACGGTGCCGAATTGCCCGATTATTTTGTCCGGACACTTCTCAAGATAATCCACGCTATTCTCCCTCCGAAGAAGGGTTCCGGCAACAGCGACAGTAAGGGTTCGAAGCTGGACGGTGGTGGTTCCAAGGGGAAGTTCAAGGCACTGGCTATTGCGGATGATAGGGACAGGGTTAAGGAGCTGCAGAAGGAGATTGAAGCTGAAGCCAAAGAGGAACAAGGTGGTGACAGAGACAGAGAGATAAACGGTGAAGATGGGGACAGAGAAACAGACAGAGGTAGAAGGGAAAGAATTGGCAGAAGGGACAGGTATGATAAATATGATAGAGATGAAAGGTATAGTGATAGAGATAGGAATAGAAATATAGATATAGATATGGATAGAGATAGAGATAGAGATAGAGATAGAGATTATGATGATGAAAGAAGGGATTCTAGGAGAAGGGGAAGGGATAGAGAGATTAATAGTGATAGTGGTAGGGATAATGATAAGGATAGATATGAGAGGTGGAGGTTAAATGGGTATGAAGATGAAAATGATGGTTATGGCAAAGAAGATGATGGTGGTGGCTGTGGTGTTGAGAGGAAAGGTTGGAGGGAACCGATACATGGTGGGGGTGGTGAAGTTGAGTTGTATAAGATTTATAAAGGGAGGGTTTCAAGGGTGATGGATACGGGTTGCTTTGTTCAGTTGGATGACGATAGAGGGAAGGAAGGACTGGTGCATGTTTCGCAGATTGCAACTAAGAGGATTAGTAATGCGAAGGATGTGGTGAAGCGGGATCAGGAGGTTTATGTGAAGGTAATATCTGTTTCTGGTCACAAGTTGAGTCTGTCAATGAGGGATGTTGATCAGCATACTGGCAAAGATCTTCCGTTGAAGAAAAGTGATGAGGACACATTTCGGATTCAGGATTTAAAGGATGGGGCAGTTGCAAGGACGGGTCTGTCAGGTATCGGGATTGTGGAGGAGGATGATATGGGTAAATCACGGAGGCCTTTGAAGAGGATGAGCTCTCCTGAGAGATGGGAGGCAAAGCAGTTGATTGCTTCAGGTGTTTTGAGTGTTTCAGAGTACCCAACTTATGACGAGGAGGAGGATGGGCTGATGTACGAGGAGGAAGGTGCTGAGGAGGAGCTTGAGATTGAGTTGAATGAGGATGAACCGGCATTTTTGCAAGGGCAGAGCAGGCATAAAATGGATACATCTCCTGTCAAGATTTTCAAAAATCCAGAGGGTTCTCTTGGTCGTGCTGCTGCCCTCCAGTCTGCACTTATAAAGGAGCGTAGAGAAGTACGAGAACAGCAGCAGCGCACCATGCTTGATTCTATTCCAAAGGATCTCAATCGTCCTTGGGAAGACCCTATGCCAGAGTCTGGTGAAAGGCATCTTGCTCAGGAGCTTAGGGGTGTTGGTTTGTCAGCCTATGATATGCCAGAATGGAAGAAGGATGCTTATGGGAAGACCATTACTTTTGGGCAAAGGTCAAAGCTTTCTATTCAAGAACAGAGGCAGAGTCTCCCAATTTACAAGTTAAAAAAAGAATTGATTCAGGCTGTCCATGATAATCAGGTGTTGGTGGTAATTGGTGAAACAGGCTCAGGCAAAACTACTCAGATCACACAGTATCTTGCTGAAGCAGGTTACACCACAAGAGGTAAAATTGGATGCACTCAACCTCGTAGGGTGGCTGCAACGTCAGTTGCAAAGAGAGTGGCAGAAGAGTTTGGATGTCGATTGGGAGAAGAAGTTGGTTATGCCATTCGGTTTGAAGATTCTACGGGACCAGATACTGTAATCAAGTACATGACCGAAGGTATGCTTCTTAGGGAAATACTGGCTGATGAGAATCTGTCACGGTATTCTGTCATAATGCTTGATGAAGCCCATGAAAGGACCATTAATACTGATGTTCTTTTTGGACTGCTTAAGCAGCTAGTGCAGTGTAGACCTGAGTTGCGATTGATTGTCACATCTGCCACTCTGGATGCAGAGAAGTTCTCAGGATATTTCTTTAACTGTAACATCTTTACAATACCCGGGAGAACTTTCCCTGTGGAGATTCTTTATAGTAAGCAGCCAGAAAGTGATTACTTAGATGCAGCTTTAATCACTGTCCTACAGATCCACTTGACTGAACCTGAAGGAGACATTCTTCTCTTCTTGACTGGCCAAGAGGAGATTGATTTTGCTTGTCAATCTCTCTACGAAAGAATGAAGGGATTAGGTAAGAATGTTCCAGAACTGATAATATTACCTGTTTATAGTGCCCTTCCTAGTGAAATGCAGTCTAGGATATTTGACCCTGCTCCTCCCGGGAAAAGGAAAGTGGTTGTGGCAACTAACATTGCTGAGGCTTCTTTGACTATTGATGGGATATTTTACGTTATTGATCCTGGGTTTGCAAAGCAAAATGTTTATAACCCAAAACAAGGACTTGATTCATTGGTGATAACTCCGATATCACAAGCTTCAGCCAAACAAAGAGCAGGACGTGCAGGGCGTACTGGACCTGGAAAATGCTATCGCCTATATACTGAGAGCGCATATAGGAATGAGATGCCTCCCACCACGATTCCTGAGATTCAAAGGATAAATCTTGCAATGACTACTCTCAACATGAAAGCTATGGGAATAAATGATCTTCTGTCCTTTGATTTTATGGATCCACCATCATCCCAAGCTATTATTTCAGCCATGGAACAGCTCTATAGTCTTGGAGCATTGGATGAAGAGGGCCTTTTAACCAAATTGGGGAGGAAAATGGCAGAATTTCCCTTGGATCCACCATTGTCTAAGATGTTACTTGCCAGTGTGGACCTTGGATGTAGTGATGAGATATTGACGATAATTTCCATGATTCAGACTGGCAATATTTTTTACAGGCCTAGGGAAAAGCAAGCCCAAGCAGATCAGAAGAGGGCAAAGTTTTTCCAGCCTGAAGGTGACCATCTCACACTGCTTGCTGTTTATGAGGCTTGGAAAGCCAAGAATTTTTCGGGACCATGGTGTTTTGAGAACTTTGTTCAATCTCGATCATTGAGGAGAGCACAGGATGTCAGGAAACAGCTTCTCACCATCATGGATAAGTATAAATTGGATGTTGTAAGTGCTGGAAAAAACTTTACCAAGATCAGAAAGGCGATCACTGCAGGATTCTTTTTCCATGCAGCAAGGAAGGATCCCCAGGAAGGCTACAGAACCCTTGTTGAGAACCAGCCTGTATATATCCATCCAAGTTCATCTTTGTTCCAGAGACAACCTAGTTGGGTCATCTACCATGAACTTGTTATGACTACTAAGGAATATATGCGTGAGGTCATAGTGATAGATCCTAAATGGCTTGTTGAATTGGCCCCAAGATTCTTCAAAGTATCAGATCCTACAAAGATGAGCAAGCGAAAGCGTCAAGAGCGGATTGAACCACTCTATGACAGATATCAGGAGCCAAATTCATGGCGTTTGAGTAAACGCCGTGCTTGA 3663 0.4409 MAVESSQDLLKKLEYLSLVSKVCTEMESHTGNADKVLAEFITELGRSSENFEEFDAKLKENGAELPDYFVRTLLKIIHAILPPKKGSGNSDSKGSKLDGGGSKGKFKALAIADDRDRVKELQKEIEAEAKEEQGGDRDREINGEDGDRETDRGRRERIGRRDRYDKYDRDERYSDRDRNRNIDIDMDRDRDRDRDRDYDDERRDSRRRGRDREINSDSGRDNDKDRYERWRLNGYEDENDGYGKEDDGGGCGVERKGWREPIHGGGGEVELYKIYKGRVSRVMDTGCFVQLDDDRGKEGLVHVSQIATKRISNAKDVVKRDQEVYVKVISVSGHKLSLSMRDVDQHTGKDLPLKKSDEDTFRIQDLKDGAVARTGLSGIGIVEEDDMGKSRRPLKRMSSPERWEAKQLIASGVLSVSEYPTYDEEEDGLMYEEEGAEEELEIELNEDEPAFLQGQSRHKMDTSPVKIFKNPEGSLGRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRRVAATSVAKRVAEEFGCRLGEEVGYAIRFEDSTGPDTVIKYMTEGMLLREILADENLSRYSVIMLDEAHERTINTDVLFGLLKQLVQCRPELRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYSKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTTIPEIQRINLAMTTLNMKAMGINDLLSFDFMDPPSSQAIISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIISMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDKYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSSLFQRQPSWVIYHELVMTTKEYMREVIVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIEPLYDRYQEPNSWRLSKRRA* 1221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0083 1220 Pfam DEAD/DEAH box helicase 573 723 IPR011545 GO:0003676|GO:0005524
Ahy16g0083 1220 ProSiteProfiles S1 domain profile. 272 341 IPR003029 GO:0003676
Ahy16g0083 1220 SMART ultradead3 565 749 IPR014001 -
Ahy16g0083 1220 Gene3D - 539 742 IPR027417 -
Ahy16g0083 1220 Coils Coil 111 131 - -
Ahy16g0083 1220 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 557 1090 IPR027417 -
Ahy16g0083 1220 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 758 938 IPR001650 -
Ahy16g0083 1220 CDD DEXHc_DHX8 562 740 IPR044762 GO:0000398|GO:0003724|GO:0005524
Ahy16g0083 1220 CDD SF2_C_RHA 744 905 - -
Ahy16g0083 1220 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 577 740 IPR014001 -
Ahy16g0083 1220 Pfam Helicase conserved C-terminal domain 765 897 IPR001650 -
Ahy16g0083 1220 Gene3D - 743 916 IPR027417 -
Ahy16g0083 1220 Pfam S1 RNA binding domain 273 333 IPR003029 GO:0003676
Ahy16g0083 1220 SMART S1_6 270 341 IPR022967 -
Ahy16g0083 1220 MobiDBLite consensus disorder prediction 82 101 - -
Ahy16g0083 1220 PANTHER ATP-DEPENDENT RNA HELICASE 91 1220 - -
Ahy16g0083 1220 SMART ha2_5 958 1048 IPR007502 GO:0004386
Ahy16g0083 1220 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 682 691 IPR002464 -
Ahy16g0083 1220 MobiDBLite consensus disorder prediction 127 155 - -
Ahy16g0083 1220 Gene3D - 266 352 IPR012340 -
Ahy16g0083 1220 Gene3D - 942 1041 - -
Ahy16g0083 1220 Coils Coil 478 498 - -
Ahy16g0083 1220 PANTHER - 91 1220 - -
Ahy16g0083 1220 Pfam Helicase associated domain (HA2) 959 1047 IPR007502 GO:0004386
Ahy16g0083 1220 CDD S1_DHX8_helicase 272 348 - -
Ahy16g0083 1220 SUPERFAMILY Nucleic acid-binding proteins 271 347 IPR012340 -
Ahy16g0083 1220 SMART helicmild6 793 897 IPR001650 -
Ahy16g0083 1220 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 1105 1180 IPR011709 -
Ahy16g0083 1220 MobiDBLite consensus disorder prediction 189 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0083 Ahy-Chr16 795535 799912 Proximal