Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy16g0078 ATGTCGTCGAAATGCAGCAAGATTCGCCACATTGTGAGGCTTCGTCAGATGCTGCGTCGCTGGCGCATCAAGGCGCGCATGTCCTCAGCTGCTATTAACCGCTCAAGCTCTTCTCCGCCGTCCGATGTTCCCGCTGGACACGTGGCGGTCTGCGTCGGCATCAACTGCACCAGATTCGTTGTGCGAGCTACTCACCTTAACCACCCTGTGTTCCAGAAGCTTCTAGTTCAGGCGGAAGAAGAGTACGGCTTCGCCAACCACGGTCCTTTGGCTATTCCCTGCGACGAAGCACTCTTTGAAGATGTTATCCGGTTCATTTCCCGCTCTGAGTCTGGATCCGGTTCGAACCGATTCTTGAACCTTGATGACTCTCAGAGACACTGCCACGTCGGAATGAGGAACAACCTTGATTTCTGGAAGCAGGAATCTCGACCGCTGCTCCACGCCTTCACTGACAAGAACATTTGGTAG 471 0.5393 MSSKCSKIRHIVRLRQMLRRWRIKARMSSAAINRSSSSPPSDVPAGHVAVCVGINCTRFVVRATHLNHPVFQKLLVQAEEEYGFANHGPLAIPCDEALFEDVIRFISRSESGSGSNRFLNLDDSQRHCHVGMRNNLDFWKQESRPLLHAFTDKNIW* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy16g0078 156 Pfam Auxin responsive protein 13 105 IPR003676 GO:0009733
Ahy16g0078 156 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 149 IPR003676 GO:0009733
Ahy16g0078 156 PANTHER SMALL AUXIN-UP RNA-RELATED 4 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy16g0078 Ahy-Chr16 711879 713166 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0078 16 711879 713166 Ahy16g0078 16 711879 713166 ECH
Ahy16g0078 16 711879 713166 Ahy6g1265 6 18986268 18987718 hybridization
Ahy16g0078 16 711879 713166 Ahy17g2293 17 110775929 110777086 PCT
Ahy16g0078 16 711879 713166 Ahy8g0114 8 2135103 2136244 PCT
Ahy17g2293 17 110775929 110777086 Ahy16g0078 16 711879 713166 PCT
Ahy8g0114 8 2135103 2136244 Ahy16g0078 16 711879 713166 PCT