Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g2716 ATGGATCCACCACCAACACAGCCACCAGCAATGCCACCACATCCATCCACCATGGCTCCCACCACTGTCATGGCTGCCACTGCCACATCAATTCAAACAAACAACCCCGACTCGGTTGAATCCTCGCCGCGCTGTCGTATCGGTGAAACATGGAATGATGAGCTTATTGTGCCGGTCCCAGGCGCCAAGCTCCGCCTCATGTGCAGCTACGGTGGCCACATCATGCCACGCCCCCATGATAAGTCCCTCAGTTACATAGGTGGTGACACTAGAATCGTGGTGGTGGATCGCAATTCAACCCTAAAGGACCTCTGTTTGCGCCTTTCCCGCACTTTACTCAATGGAAGACCCTTCACACTCAAGTACCAGTTACCAAACGAGGACCTTGACAACCTCATCTCTGTCACCACTGATGAAGACCTTGACAACATGATCGAAGAGTATGATCGTGTGGCTGCAGCATCAGCATCTACCCTGAAGCCTTCACCTTCAAGACTCAGGGTGTTCCTGTTCTTCTCCAAGCCAGAGACCACTGTTTCAATGGGATCCCTCCTTGATGATGCGAAATCTGAGACATGGTTCGTGGATGCGCTCAACAACTCGGGGATGCTCACAAGGGGTGTGTCAGATTCCGCAGCAGGAGAAACCATTGTAAACCTTGATGGTGTTGGCCCTGCTGTTTCAGCTAGTGGTTCAAGCAACAACTTGGAGGCTCAGGCTGCGGCAGTGGCAGAGTCTTTGGTTCTGGCTGATAATATCACTGGCAACAATAACAACAACAACAACAACAAGGTGAAGAATTTGCAGGATGTTGCAGCTGTGAATTCACTACCTGGCTCACCTTCATCAGCTTCTTCTCCTTCAATGGCTAATCTCCCACCCATCCGGGTTCGTGTCGATGACAATGGTGCTAGTAGGCTTCAGCAGGAGCAAAGGGTTGGGGTGATGGAGGAGCAGTTAGCACAGATGACAATTGGCGCAAGTGGTGTGAGGCGAGATGAAGGGTTTGTTGTTGTTCCCTCTACTGTGGCTATGCCTGCTGCAGTGCCTGCAACTATGAGTTTGGCTGCAGCAGCAATGGTTACTAGCAATAGTAGTGATATCATGAATAGGCTTATTATCTCTGAGGATGAGAGATCAGATCCTGGTGTTCCTCTTGGGTTTGGGAAGCCTCCTTTACCATTGCAACTTGTGCAACCAAGGACTGGTGGTGGTGTGAGTTTACCTTCTCCAGATTCAGTTGCAAGTGACAGTAGTAGCATTGCATCAACAAATTCTTTCTCGAAGAATGTGTACTATCAAGAACAAGTCCAACCTTCACATGTAGATAACAAAGCTCCTACTATAAGCAATGCCAAGATTGAAATTAGAGAACAAATTCAGGATCCAAATTACACGTTACCTCCACAATTGGATCAAAACCAGCAACTCCACCAGCAATTTGTGCAAGCAAGCAGCCCCTACATTCACCACCCTGCAGCCGCCACCAATACAGTGCCAGTGTCATCTTACTACCCAGTTTACGCACCGCCGCCACCGCTGCCATCACAGCCAACACTTCACCAACATCCAATTCCCCAAACTCAACAACAGCAACAGTATCAACCAGTTTATGTTATGCCTGTTGGACACACACAACAACCATACAATGTAACATTGCAACACAACATTGCTGATCCTAACATGGTAGCATCAGGTAGACAACTAGTACCCCAGAGTATTGCTGCTCCTGCAGTGTCAACAACAGCATACAAAGATGGCACATTACCAATTTACCCTCCTAGGCCAAATACCCAACCACAAACTACTCAGGCATTTATTCAAATACCTTCTAGTCACTTTCAGCAACAACCACAGTATGTGGGTTTGACCCAAGTTCAGCACCATCAACAACCACCACCACCACAGCACATTGCTGTGGTTCCATCTGGTAGTGGTGGAGGTGGTGGTGCTAATTACGGCTATGAATATGGTGGTGGCACTGTGCAAGATCAAGCTGCATACTACACACAACAGCAACAAGCTACTACAGCTCCATTGACTTCTCAGTACCAATCCATGACTCCGGCGGCGGCAGCGGCGGCGCTATCGGATGCTTCGAAGCCATTCCCCAATGAAAATCTTCAGCAGCCAAACAGAGCTTCACAACCCGTATAG 2157 0.4873 MDPPPTQPPAMPPHPSTMAPTTVMAATATSIQTNNPDSVESSPRCRIGETWNDELIVPVPGAKLRLMCSYGGHIMPRPHDKSLSYIGGDTRIVVVDRNSTLKDLCLRLSRTLLNGRPFTLKYQLPNEDLDNLISVTTDEDLDNMIEEYDRVAAASASTLKPSPSRLRVFLFFSKPETTVSMGSLLDDAKSETWFVDALNNSGMLTRGVSDSAAGETIVNLDGVGPAVSASGSSNNLEAQAAAVAESLVLADNITGNNNNNNNNKVKNLQDVAAVNSLPGSPSSASSPSMANLPPIRVRVDDNGASRLQQEQRVGVMEEQLAQMTIGASGVRRDEGFVVVPSTVAMPAAVPATMSLAAAAMVTSNSSDIMNRLIISEDERSDPGVPLGFGKPPLPLQLVQPRTGGGVSLPSPDSVASDSSSIASTNSFSKNVYYQEQVQPSHVDNKAPTISNAKIEIREQIQDPNYTLPPQLDQNQQLHQQFVQASSPYIHHPAAATNTVPVSSYYPVYAPPPPLPSQPTLHQHPIPQTQQQQQYQPVYVMPVGHTQQPYNVTLQHNIADPNMVASGRQLVPQSIAAPAVSTTAYKDGTLPIYPPRPNTQPQTTQAFIQIPSSHFQQQPQYVGLTQVQHHQQPPPPQHIAVVPSGSGGGGGANYGYEYGGGTVQDQAAYYTQQQQATTAPLTSQYQSMTPAAAAAALSDASKPFPNENLQQPNRASQPV* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g2716 718 MobiDBLite consensus disorder prediction 400 421 - -
Ahy15g2716 718 CDD PB1_UP2 67 171 - -
Ahy15g2716 718 Gene3D - 84 171 - -
Ahy15g2716 718 SMART PB1_new 78 171 IPR000270 GO:0005515
Ahy15g2716 718 PANTHER OCTICOSAPEPTIDE/PHOX/BEM1P FAMILY PROTEIN 1 711 - -
Ahy15g2716 718 PANTHER OS05G0427100 PROTEIN-RELATED 1 711 - -
Ahy15g2716 718 SUPERFAMILY CAD & PB1 domains 79 182 - -
Ahy15g2716 718 MobiDBLite consensus disorder prediction 702 718 - -
Ahy15g2716 718 MobiDBLite consensus disorder prediction 686 718 - -
Ahy15g2716 718 Pfam PB1 domain 79 171 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g2716 Ahy-Chr15 143740802 143743897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g2716 63 200 MAP Kinase Kinase Kinase AT5G57610 44.286 5.13e-27 115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy19g3222 19 155344971 155347912 Ahy15g2716 15 143740802 143743897 ECH
Ahy15g2716 15 143740802 143743897 Ahy15g2716 15 143740802 143743897 ECH
Ahy15g2716 15 143740802 143743897 Ahy5g2529 5 100745244 100748608 hybridization