Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy15g0692 ATGCCCTCCTCCGACTCCGGCGAAAGCCGTCGATCAGCCAAGCCTCACAACACCTCCCTAGCCCCACCGCCGGCCGAGCAAGAGCACCTGCCGTGCCCTCGCTGCGACTCTACTAATACCAAGTTCTGCTACTACAACAACTACAACTTCTCCCAGCCTCGCCACTTCTGCAAGTCCTGCCGCCGCTACTGGACCCACGGCGGCACTCTCCGTGACATCCCCGTCGGCGGTGGAAGCCGTAAAAACGCCAAGCGCTCTCGCACCGTTCCTTCAGCCTCCACCGCCACAACCTCCTCCTCCGGAGGTGCGGCCGTCACCTCGGTTTCTTCTGTGACCCCGCTCACCATGGTTCCCGTGGCCGGGAACAACCACCCCGGAGCACCCGTGCAGTTCGGTGGAGTAGTTGTGGATGGTGAAGCAAAGGGTAATAACGTGAGCTTGTGCGGTGGGAGCTTCACTTCGTTGCTGAGCAACACACAGCAGGGTCCTGGTGGGTTTCTGGCTCTGGGTGGGTTTGGGCTTGGTCTTGGGCCTGGCCTCGAAGATGTTGGATTTGGGATGGGGATGGGGAGAGGCGGTTGGGCTTTCCCGGGCGTGGTGGCGGACGGAGGCAGCATTGGCGGCGGTGTTGCGGGATCCGGTGTTGGGCACACGTGGCAGTTTGAAGGCGGCGATCAAGGTGGCTTTGTTTCTGGAGACTGCTTCCCTTGGCCGGGACTAGCCATTTCCACACCCGGAAATGGTCTCAAATAA 753 0.6122 MPSSDSGESRRSAKPHNTSLAPPPAEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRSRTVPSASTATTSSSGGAAVTSVSSVTPLTMVPVAGNNHPGAPVQFGGVVVDGEAKGNNVSLCGGSFTSLLSNTQQGPGGFLALGGFGLGLGPGLEDVGFGMGMGRGGWAFPGVVADGGSIGGGVAGSGVGHTWQFEGGDQGGFVSGDCFPWPGLAISTPGNGLK* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy15g0692 250 MobiDBLite consensus disorder prediction 84 105 - -
Ahy15g0692 250 MobiDBLite consensus disorder prediction 1 30 - -
Ahy15g0692 250 MobiDBLite consensus disorder prediction 71 105 - -
Ahy15g0692 250 Pfam Dof domain, zinc finger 28 84 IPR003851 GO:0003677|GO:0006355
Ahy15g0692 250 Coils Coil 249 250 - -
Ahy15g0692 250 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 247 IPR045174 GO:0003700|GO:0006355
Ahy15g0692 250 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Ahy15g0692 250 MobiDBLite consensus disorder prediction 1 16 - -
Ahy15g0692 250 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Ahy15g0692 250 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 1 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy15g0692 Ahy-Chr15 9280161 9281619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy15g0692 1 250 C2C2-Dof Transcription Factor Family AT3G50410 52.652 1.48e-64 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Ahy15g0692 zf-Dof 3.50E-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy15g0692 - - aip:107620759 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy15g0692 15 9280161 9281619 Ahy15g0692 15 9280161 9281619 ECH