Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4373 ATGTGGCCTACATTAGTGGTTAATAAGATTCTCAAGAAGAGGCTAGGAAGCACCAACTTTGTCGCTGATTATCATCATACTTATGAGCAACCCTTGTTGTCCATTGATGAACAATCCATTCATCATCATCCAAATTACAACAAGTACAACTACAACACATGGAACGTAGGTGGGGTTGCACCACACCAAGATTTGAACTTGGAGGATTTGTTGGACACATGCAACAACTCCTGTGACATCTATGTACTAGGGTTTCAAGAAATAGTGCCTCTGAAGGCATCAAACGTTCTGGGATCAGAGAACAGCGAGGTTTCTAGCAAATGGAATTCCTTAATCAGGGAAGCTCTGAACAAGAAGACAGAAAATGATGATGAGTGGAAAGGAGACCCACAAGAATTCCAGTGTATCATAAGCAAGCAAATGGTTGGTGTGTTCATATCTGTGTGGACAAGGAAAGATCTTCGCCCTTTCATTCACCATCCAAGTGTCTCTTGTATTGGATGTGGCATCATGGGCTGCTTAGGAAACAAGGGATCGGTGTCAGTGAGATTTCGGTTACATGAAACAAGCTTCTGCTTTGTGTGCAGCCATCTTGCATCAGGGGGCAGAGAAGGAGATGAGAAGCACAGAAACTCTAACGTTGCAGAAATATTTTCCCGGACAACTTTTCCCAAAGGCCCTTTGTTTGATTTGCCAAGAAAGATTCTTGATCATGACCATGTAGTATTGCTAGGAGATCTAAATTATAGAATTTCTCTACCAGAAGAATCAACACGGTTACTTGTTGAAAAAGGAGACTGGGATTCCTTATTACAAAATGATCAGCTAATGATGGAGCTAGAGAACGGAAACATGTTAAGAGGGTGGCATGAAGGGCCAATCAAATTTGCTCCAACATACAAGTATTTTCCAAATTCAGATATGTATTATGGATGTTGTTATCATGGGAAAAAAGCAGAAAAGAAGCGAGCACCAGCATGGTGTGACCGAATAGTGTGGTATGGAAATGGTTTAAAGCAACTTGTGTACAATAGAAGTGAGTCAAAACTATCAGACCACAGGCCTGTGAAGGCAATATTCATAGCTCAAGTGAGGGTTTCAACAGAGCTAGGAAATTTGCAAACCTTGTTTCTATCAGAAAGATTTGAACACATTAAAACTCCTTTTGGAGTTTCTACAACCAATGATGATTTTCTATGTAAAAAACAACTGAGTTTCCGGTTGTGA 1227 0.4051 MWPTLVVNKILKKRLGSTNFVADYHHTYEQPLLSIDEQSIHHHPNYNKYNYNTWNVGGVAPHQDLNLEDLLDTCNNSCDIYVLGFQEIVPLKASNVLGSENSEVSSKWNSLIREALNKKTENDDEWKGDPQEFQCIISKQMVGVFISVWTRKDLRPFIHHPSVSCIGCGIMGCLGNKGSVSVRFRLHETSFCFVCSHLASGGREGDEKHRNSNVAEIFSRTTFPKGPLFDLPRKILDHDHVVLLGDLNYRISLPEESTRLLVEKGDWDSLLQNDQLMMELENGNMLRGWHEGPIKFAPTYKYFPNSDMYYGCCYHGKKAEKKRAPAWCDRIVWYGNGLKQLVYNRSESKLSDHRPVKAIFIAQVRVSTELGNLQTLFLSERFEHIKTPFGVSTTNDDFLCKKQLSFRL* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4373 408 Pfam Endonuclease/Exonuclease/phosphatase family 53 353 IPR005135 GO:0003824
Ahy13g4373 408 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 5 383 IPR045849 GO:0004445|GO:0046855
Ahy13g4373 408 SMART i5p_5 45 368 IPR000300 GO:0016791|GO:0046856
Ahy13g4373 408 Gene3D Endonuclease/exonuclease/phosphatase 31 383 IPR036691 -
Ahy13g4373 408 SUPERFAMILY DNase I-like 53 365 IPR036691 -
Ahy13g4373 408 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 5 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4373 Ahy-Chr13 143420129 143423126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy13g4373 53 373 Acyl Lipid Metabolism Gene Families AT1G65580 29.867 3.51e-36 139
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4373 13 143420129 143423126 Ahy13g4373 13 143420129 143423126 ECH