Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g4299 ATGGTGAGGGATGATGAGAAGAGGATGATGATGATGATGGAGCAAGAGCAAGAAGAGGAAGCTGTGCCTGCATGGCTATCGAAGCTTATGGGAGAGAGATTCTTCGGAGAGTGTGGGGCCCACCAGAACCTCCGAAAGAACGACAAGAATGTCCTTTGCCTCCGCTGCTGCCTCTCCCTCTGCCCTCACTGCCTCCCTCTCCACCCACACCACCACCCTCTCCTCCAGGTGAGAAGGTATGTCTACCATGACGTGGTTCGATTGGGTGATCTTGAAAAGCTCATTGATTGCTCCAATATTCAGCCATACACGATTAATGGGGCGAAAGTGATATTCTTGAATGAGAGGGCACAGTCAAGGTCATCATGCAGAGGTGGCACTGGCAACTCTTGCTGCTCTTGTGACAGGATTCTTCAGGACCCCTTCCACTTCTGTTCTCTCTCATGCAAGGTTGATCACATGGTGTATGAGGGTGAAAGGTTGTCGAGCATTTTGCATCGATTCGATGAATCAGATTTCTCGTTTTCGCAGTTCGAGGGTCTGAGAGTAGATAGTAGTTCGGAGCTAGTTGATGAAGATAATACCCAATTTGCCCCCAATGGCTCTTGCTCCAACACAGATGCCACAGCCAGTAATTCCGTAATTTCATGTGAAGCCAATAGGAACAAGAACAAGACCAAGACCAAGTCCAAGTCCAATGGCTTCTTCCATTCTCTCGGTAGCAGGCGAAAAGGTGCTCCTCATAGGGCTCCTTTCTGCTAG 762 0.4921 MVRDDEKRMMMMMEQEQEEEAVPAWLSKLMGERFFGECGAHQNLRKNDKNVLCLRCCLSLCPHCLPLHPHHHPLLQVRRYVYHDVVRLGDLEKLIDCSNIQPYTINGAKVIFLNERAQSRSSCRGGTGNSCCSCDRILQDPFHFCSLSCKVDHMVYEGERLSSILHRFDESDFSFSQFEGLRVDSSSELVDEDNTQFAPNGSCSNTDATASNSVISCEANRNKNKTKTKSKSNGFFHSLGSRRKGAPHRAPFC* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g4299 253 Pfam PLATZ transcription factor 78 151 IPR006734 -
Ahy13g4299 253 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 23 252 - -
Ahy13g4299 253 PANTHER - 23 252 - -
Ahy13g4299 253 MobiDBLite consensus disorder prediction 223 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g4299 Ahy-Chr13 142611881 142615504 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Ahy13g4299 PLATZ 1.50E-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g4299 13 142611881 142615504 Ahy13g4299 13 142611881 142615504 ECH
Ahy13g4299 13 142611881 142615504 Ahy3g4028 3 139633540 139637425 hybridization