Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3906 ATGGCGCCAAATGCCCTCTCCTATGCTCCCGCCTTTCGCATTCTCACCATAATCCTCCTCCTGATCCGCCCAAGCGCGGCCACCGCCCATGACTACCACGACGCTCTCCGCAAGAGCATCCTCTTCTTCGAAGGCCAGCGCTCCGGCAGACTCCCACCCGACCAGCGCCTCCGATGGCGCCACGACTCCGCATTACACGACGGCGCCACCGCCGGATTGGACTTGACTGGAGGGTACTACGACGCCGGGGACAACATCAAGTTCGGGTTTCCGATGGCGTTCACTACAACAATGCTGGCGTGGAGCGTGATAGACTTCGGGAGGAGCATGGGGCCTGAGCTCGGGAACGCATTGAAGGCGGTGAGGTGGGGAACGGACTACCTGCTGAAGGCAACGTCGAAGGTAGGGACCGGTGTGGTGTTCGTGCAGGTGGGAGACCCTCTCTCGGACCATAACTGTTGGGAGAGGCCAGAGGACATGGACACTCTCCGTACCGTTTACAAGGTGGATGGGTCCCACCCTGGCTCTGACGTGGCAGGAGAAACGGCCGCTGCACTTGCCGCTGCCTCCATCGTCTTTAGATCACGTGATCCCGCTTACTCTAGACTTCTCCTCAATCGAGCCGTTACGGTGTTCGGGTTCGCTGACAGGCATCGTGGTGCATACAGTAACAGCCTAAAGAAAGCAGTCTGCCCATTTTACTGTGACGTCAATGGGTACCAGGACGAGCTGTTGTGGGCAGCAGCGTGGTTGCACAAGGCGTCGCGTAGGCGTCAGTACAGGGAATACATTGTAAGGAACGAGGTGGTATTGAGAGCTGGGGACACCATTAATGAGTTTGGTTGGGATAACAAGCATGCCGGGATTAATGTTCTCATTTCCAAGGAGGTGTTGATGGGAAGAGCAAACTATTTTGCGTCGTTCAAGCAAAATGCAGATGGATTTATTTGTTCGATATTGCCCGGAATTTCCCACCCTCAAGTTCAGTATTCCCCAGGTGGTCTTATTTTCAAGGCTGGAGGAAGCAACATGCAGCATGTAACGTCCCTCTCTTTTCTGCTCCTAGCCTATTCTAACTACCTAAGCCACGCCAATAAGGTTGTGCCATGTGGCGAGACCACTGCCACGCCAGCTTTGCTCAAACACCTTGCTAAACGCCAGGTGGACTACATTCTTGGGGATAACCCAATGGGAATGTCGTACATGGTTGGATACGGTGCTCGCTACCCACAGAGGATACATCACCGGGCCAGCTCGCTCCCATCGGTGGCGGTCCACCCAGCCCACATTGGATGCAAAGCTGGATCTCGATATTTCCTTAGCCCAAATCCCAACCCGAATGTATTGGTCGGAGCCGTGGTTGGTGGGCCTAACAACAACACAGATGCTTTCCCGGATTCCAGGCCTTTCTATCAGGAGACTGAGCCCACTACATATATCAATGCCCCTCTAGTGGGCCTGCTCGCTTTCTTTTCAGCCCACTCTTGA 1488 0.5491 MAPNALSYAPAFRILTIILLLIRPSAATAHDYHDALRKSILFFEGQRSGRLPPDQRLRWRHDSALHDGATAGLDLTGGYYDAGDNIKFGFPMAFTTTMLAWSVIDFGRSMGPELGNALKAVRWGTDYLLKATSKVGTGVVFVQVGDPLSDHNCWERPEDMDTLRTVYKVDGSHPGSDVAGETAAALAAASIVFRSRDPAYSRLLLNRAVTVFGFADRHRGAYSNSLKKAVCPFYCDVNGYQDELLWAAAWLHKASRRRQYREYIVRNEVVLRAGDTINEFGWDNKHAGINVLISKEVLMGRANYFASFKQNADGFICSILPGISHPQVQYSPGGLIFKAGGSNMQHVTSLSFLLLAYSNYLSHANKVVPCGETTATPALLKHLAKRQVDYILGDNPMGMSYMVGYGARYPQRIHHRASSLPSVAVHPAHIGCKAGSRYFLSPNPNPNVLVGAVVGGPNNNTDAFPDSRPFYQETEPTTYINAPLVGLLAFFSAHS* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3906 495 Pfam Glycosyl hydrolase family 9 32 488 IPR001701 GO:0004553|GO:0005975
Ahy13g3906 495 SUPERFAMILY Six-hairpin glycosidases 30 493 IPR008928 GO:0005975
Ahy13g3906 495 PANTHER ENDOGLUCANASE 10 495 - -
Ahy13g3906 495 Gene3D - 27 495 IPR012341 GO:0005975
Ahy13g3906 495 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 3. 464 482 IPR033126 -
Ahy13g3906 495 PANTHER ENDO-1,4-BETA-GLUCANASE 10 495 - -
Ahy13g3906 495 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 390 416 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3906 Ahy-Chr13 138521927 138526946 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3906 13 138521927 138526946 Ahy13g3906 13 138521927 138526946 ECH
Ahy13g3906 13 138521927 138526946 Ahy3g3634 3 135704599 135709655 hybridization