LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy13g3887	ATGGAACCCTGCCAAAAGCCTCCGCCGCCACCGGAACAATCCGACGCCTCTTATTTTTTCTCCGCCGTCACCGACAGCACCAACATGCTCGCCGACTTTGACTGGATCGGAGGAGAAGAAGGCGACACCATGTGTCTGCCGCCGGAGAACAACAGCAACAACAATAATCAATCGCCGTCTTCAAGCTCAGCTGAGGATCCGCCGGAGAGTTCGATCGCCTCCGACGGGAAACAGCTCGACAAAGAGAAACCACCGAGTAGAAGTAAGAAGAAGCAGAAACGAATGAAGCAGCCACGGTTTGCTTTTATGACTAAGAGTGAAACCGATCATCTTGAAGATGGCTACAGATGGCGAAAGTACGGCCAGAAGGCAGTTAAAAATAGTCCATTCCCCAGGAGCTACTATCGTTGCACAAACAACAACTGCAGTGTGAAGAAAAGGGTGGAACGCTCCTCGGAGGACCCAACTATTGTGATAACCACATATGAAGGCCAACACTGCCACCACTCCGTAGGGACATTCCACCACCACCGACAACTAAGTGGCATGCTTAGTAGTAATCAAAAATCCACATTTGCAACTCAATTTTCTCTTGGAAATATGTCACACTTCTATTATCCAATTGATCAATTACCTGAAGAAAACACACTTATTAGTAGTAGTGTTTCTGATGATCCTTATTGTCAATCACACAATAATGATAATTACAATGGAAGACGCAGCATTACATTGGCAGATTCATCAACCCCAGAAGAGCTACCCACAGATGATGGACTACTTGGAGATATTCTTCTGCCTAGGCAAATGCGTAACGGATGA	819	0.4652	MEPCQKPPPPPEQSDASYFFSAVTDSTNMLADFDWIGGEEGDTMCLPPENNSNNNNQSPSSSSAEDPPESSIASDGKQLDKEKPPSRSKKKQKRMKQPRFAFMTKSETDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNNNCSVKKRVERSSEDPTIVITTYEGQHCHHSVGTFHHHRQLSGMLSSNQKSTFATQFSLGNMSHFYYPIDQLPEENTLISSSVSDDPYCQSHNNDNYNGRRSITLADSSTPEELPTDDGLLGDILLPRQMRNG*	273

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy13g3887	272	Gene3D	WRKY domain	98	164	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Ahy13g3887	272	SUPERFAMILY	WRKY DNA-binding domain	103	169	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Ahy13g3887	272	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	44	216	IPR044810	GO:0003700
	Ahy13g3887	272	Pfam	WRKY DNA -binding domain	112	168	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Ahy13g3887	272	MobiDBLite	consensus disorder prediction	46	69	-	-
	Ahy13g3887	272	MobiDBLite	consensus disorder prediction	34	101	-	-
	Ahy13g3887	272	ProSiteProfiles	WRKY domain profile.	106	171	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Ahy13g3887	272	PANTHER	WRKY TRANSCRIPTION FACTOR 48-RELATED	44	216	-	-
	Ahy13g3887	272	SMART	WRKY_cls	111	170	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy13g3887	Ahy-Chr13	138316184	138320645	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Ahy13g3887		WRKY	5.80E-26	CL0274

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Ahy13g3887	13	138316184	138320645	Ahy13g3887	13	138316184	138320645	ECH