Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy13g3886 ATGGCAGCTCTACCCTTCTCAACAATCTGCAGGCATTCCAATTCATCTTTACACTCCAATTCCAAATCAAGCTTCACTGGTTTCAGTCAAAGAAACAATATTGGCCACTTGTTTCTCATCAGGAAGTGCAGTTCCAGAAGGGTAGTAAGAAAATTATGTGTGAAGAATGTTGCCAGTGATAAAAAGCAGGAACAGAATGAACCACTCACTGAACAAGAAACTTTAGATAAATTTGTGCCAGATTCTGCATCTATTGCTGCAAGCATTAAGTATCATGCCGAGTTCACCCCGTCTTTCTCTCCGGAGAAGTTTCAGCTAAGTAAAGCATTCTATGCGACTGCAGAGAGTGTCCGTGATTCCCTCATCATAAACTGGAATGCAACGTATGAATATTATGAGAGGATGAATGTTAAGCAAGCTTACTATATGTCCATGGAGTATCTACAGGGTAGGGCATTGCTAAATGCAATTGGAAATTTACAACTTTCAGGCCCTTATTCTGAGGCTCTAAGAAAGCTGGGACACAATTTAGAGAATGTGGCTAATCAGGAGCCAGATGCTGCCCTTGGGAACGGAGGATTAGGCCGCCTTGCTTCTTGCTTTTTGGACTCCTTGGCAACATTGAATTACCCTGCATGGGGTTATGGGCTAAGATACAAGTATGGTTTGTTCAAACAACTTATAACAAAGGATGGTCAAGAGGAAGTTGCTGAAAGCTGGCTCGAGATGGGAAATCCCTGGGAAATTCCTAGAAACGATGTTTCTTATCCGGTTAAATTCTATGGAGAAATTACTTCAGGGCCAGATGGAAGAAAAGAATGGATTGGAGGAGAAAATATCATGGCAGTTGCTTATGATGTTCCAATACCAGGATACAAAACTAGAACCACTATAAACTTGAGGTTGTGGTCCACTAAAGTTTCACCTGAAGAGTTCGATTTGCGAGCTTACAATGCTGGGGATCATGACAAAGCATATACTGCTCTGAAGAATGCAGAGAAGATCTGCTATGTATTATACCCTGGGGACGAATCGATTGAAGGGAAGACTCTACGATTGAAGCAACAGTATACCTTATGCTCGGCCTCTCTCCAGGATATTATTGCTCGTTTCGAAAAGAGATCAGGAAAGGCCATTGATTGGGATACTTTCCCGGATAAAGTGGTGGTCCAAATGAATGATACTCACCCAACACTCTGCATTCCAGAGTTGATTAGAATATTGATGGATGTAAGATATATTTGTTTTGATGGCTCTTATGTTAGAACCGTTGCTTACACAAATCACACAGTTCTACCTGAGGCACTAGAGAAATGGAGTTTGAAACTTCTGCAGGATTTGCTTCCTCGACACGTGGAGATAATAAGAAAAACTGATGAAGTGTTCATACATGAAATTATATCTGAGTATGGGATGAATGACCTTGACTTGTTGGATCAAAAGCTCAGAAAGATGAGAATACTGGAGAACATTGAGTTGCCTAACTCAGTGGTTGAGCTGATTAATAGCTCAATAGAGATTCCTGATACTGATCCTATAGAGGAAAGAGATGTTATTGATACTGATATAAAGGCAACAGAAGAGAAGGAAGAAGAAGCAGAAGCCAAAGAAGTGGAAGAAGACGAAGACGAAGTAGGGAAAGAAGAACCGGAAGAAGATGATGGCGAAGAAGAGCCATCTGTGGAAGAGGATACCGAAAAGAAAACAACATGGACATTCAAAGTTGATTCAAAACAGCCAAAAATGGTTCGCATGGCTAATCTATGCGTTGTAGGTGGTTTTTCTGTGAATGGAGTAGCTGAGATTCACAGTGAGATTGTAAAACAGGAAGTTTTCAATGATTTCTACGAGATGTGGCCTGAAAAGTTCCAGAATAAAACAAATGGGGTGACCCCAAGAAGATGGATCCGCTTTTGCAATCCTGATCTTAGTAAAATCATAACCAAGTGGATTGGAACAGAGGACTGGGTCACAGATATTGAGAAATTGGCTATACTTCGCAAGTTTGCAGATAATGAGGATTTACAATCAGAATGGATGGAATCAAAGAGAAGGAACAAGATTAAGGTTGCATCATTTATCAAGGAAAGAACTGGTTATGATGTTAGTTCAAATGCAATGTTTGATGTACAGGTGAAGCGCATTCATGAATACAAACGGCAGTTACTGAATATCTTGGGAATCGTTTATCGCTACAAAAAGATGAAAGAAATGAGTGATGAGGAAAGGAAACAAAGTTTTGTTCCACGAGTTTGTATTTTCGGAGGGAAAGCATTTGCAACATATGTTCAAGCCAAGAGAATTGTAAAATTCATCACAGATGTAGGAGCCACAATCAATCATGATCCAGAGATTGGAGACCTATTAAAGGTTGTATTTGTTCCTGATTACAATGTCAGTGTGGCCGAAATGCTAATTCCTGGCAGCGAGTTGTCGCAGCACATCAGCACGGCTGGTATGGAGGCCAGTGGAACAAGCAACATGAAGTTTGCAATGAATGGATGCTTACTTATTGGAACTCTTGATGGGGCTAATGTTGAAATAAGGGAAGAAGTTGGAGAAGATAACTTCTTCCTCTTTGGCGCGCGTGCTCACGAAATCTCTACGCTGCGAAAAGAAAGAGCAGAGGGAAAGTTTGTAGCAGATCCACGTTTTGAAGAAGTAAAGGCATATGTAAGGAGTGGTGTTTTTGGAAGCTACAACTATGAAGAATTGATTGGGTCCTTGGAAGGGAATGAAGGGTATGGTCGTGCTGATTACTTCCTTGTTGGAAAGGACTTCCCTAGCTACTTGGACTGCCAAGACGCCATCGACATAGCATATCGAGATCAAAAGAGGTGGACAAGAATGTCAATCTTGAACACAGCCGGTTCATACAAATTCAGCAGTGACCGGACTATTCATCAATATGCCAGAGACATTTGGAGAATTCAACCACTTTTCCTGCCTTGA 2952 0.4106 MAALPFSTICRHSNSSLHSNSKSSFTGFSQRNNIGHLFLIRKCSSRRVVRKLCVKNVASDKKQEQNEPLTEQETLDKFVPDSASIAASIKYHAEFTPSFSPEKFQLSKAFYATAESVRDSLIINWNATYEYYERMNVKQAYYMSMEYLQGRALLNAIGNLQLSGPYSEALRKLGHNLENVANQEPDAALGNGGLGRLASCFLDSLATLNYPAWGYGLRYKYGLFKQLITKDGQEEVAESWLEMGNPWEIPRNDVSYPVKFYGEITSGPDGRKEWIGGENIMAVAYDVPIPGYKTRTTINLRLWSTKVSPEEFDLRAYNAGDHDKAYTALKNAEKICYVLYPGDESIEGKTLRLKQQYTLCSASLQDIIARFEKRSGKAIDWDTFPDKVVVQMNDTHPTLCIPELIRILMDVRYICFDGSYVRTVAYTNHTVLPEALEKWSLKLLQDLLPRHVEIIRKTDEVFIHEIISEYGMNDLDLLDQKLRKMRILENIELPNSVVELINSSIEIPDTDPIEERDVIDTDIKATEEKEEEAEAKEVEEDEDEVGKEEPEEDDGEEEPSVEEDTEKKTTWTFKVDSKQPKMVRMANLCVVGGFSVNGVAEIHSEIVKQEVFNDFYEMWPEKFQNKTNGVTPRRWIRFCNPDLSKIITKWIGTEDWVTDIEKLAILRKFADNEDLQSEWMESKRRNKIKVASFIKERTGYDVSSNAMFDVQVKRIHEYKRQLLNILGIVYRYKKMKEMSDEERKQSFVPRVCIFGGKAFATYVQAKRIVKFITDVGATINHDPEIGDLLKVVFVPDYNVSVAEMLIPGSELSQHISTAGMEASGTSNMKFAMNGCLLIGTLDGANVEIREEVGEDNFFLFGARAHEISTLRKERAEGKFVADPRFEEVKAYVRSGVFGSYNYEELIGSLEGNEGYGRADYFLVGKDFPSYLDCQDAIDIAYRDQKRWTRMSILNTAGSYKFSSDRTIHQYARDIWRIQPLFLP* 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy13g3886 983 Coils Coil 516 548 - -
Ahy13g3886 983 TIGRFAM P_ylase: glycogen/starch/alpha-glucan phosphorylases 568 977 IPR011833 GO:0004645|GO:0005975|GO:0030170
Ahy13g3886 983 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 575 980 - -
Ahy13g3886 983 Gene3D Glycogen Phosphorylase B; 633 962 - -
Ahy13g3886 983 Gene3D Glycogen Phosphorylase B; 522 632 - -
Ahy13g3886 983 PANTHER ALPHA-1,4 GLUCAN PHOSPHORYLASE L-2 ISOZYME, CHLOROPLASTIC/AMYLOPLASTIC 29 983 - -
Ahy13g3886 983 MobiDBLite consensus disorder prediction 527 572 - -
Ahy13g3886 983 ProSitePatterns Phosphorylase pyridoxal-phosphate attachment site. 821 833 IPR035090 -
Ahy13g3886 983 CDD GT35_Glycogen_Phosphorylase 88 977 - -
Ahy13g3886 983 PIRSF Glucan_phosphorylase_GlgP 77 487 IPR000811 GO:0005975|GO:0008184
Ahy13g3886 983 PIRSF Glucan_phosphorylase_GlgP 531 982 IPR000811 GO:0005975|GO:0008184
Ahy13g3886 983 Gene3D Glycogen Phosphorylase B; 80 508 - -
Ahy13g3886 983 PANTHER GLYCOGEN PHOSPHORYLASE 29 983 IPR000811 GO:0005975|GO:0008184
Ahy13g3886 983 Pfam Carbohydrate phosphorylase 567 977 IPR000811 GO:0005975|GO:0008184
Ahy13g3886 983 Pfam Carbohydrate phosphorylase 170 490 IPR000811 GO:0005975|GO:0008184
Ahy13g3886 983 MobiDBLite consensus disorder prediction 532 561 - -
Ahy13g3886 983 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 70 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy13g3886 Ahy-Chr13 138301098 138306864 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy13g3886 13 138301098 138306864 Ahy13g3886 13 138301098 138306864 ECH